RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ABHD14A-ACY1A0A1B0GW23 586 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 EFCAB14O75071 495 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 WDR5P61964 334 aaKnown RBP28.54■■■□□ 2.16
HLA-C-204ENST00000415537 AKAP17AQ02040 695 aaKnown RBP28.54■■■□□ 2.16
HLA-C-204ENST00000415537 IKBKEQ14164 716 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 TRAF7Q6Q0C0 670 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 CCDC12Q8WUD4 166 aaPredicted RBP28.54■■■□□ 2.16
HLA-C-204ENST00000415537 GLG1Q92896 1179 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 AGXT2Q9BYV1 514 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 KCNH7Q9NS40 1196 aa28.54■■■□□ 2.16
HLA-C-204ENST00000415537 NRCAMQ92823 1304 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 CA3P07451 260 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 IGFBP4P22692 258 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 ZNF76P36508 570 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 ARHGAP4P98171 946 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 SDF4Q9BRK5 362 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 TMEM260Q9NX78 707 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 ERAP1Q9NZ08 941 aa28.53■■■□□ 2.16
HLA-C-204ENST00000415537 PTPRSQ13332 1948 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 GSTTP1A0A1W2PQM5 241 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 TLL1O43897 1013 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 CAND2O75155 1236 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 LGR5O75473 907 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 CLK2P49760 499 aaKnown RBP28.52■■■□□ 2.16
HLA-C-204ENST00000415537 CEP55Q53EZ4 464 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 RUFY3Q7L099 469 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 ZBED2Q9BTP6 218 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 SMARCAD1Q9H4L7 1026 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 JPH1Q9HDC5 661 aaPredicted RBP28.52■■■□□ 2.16
HLA-C-204ENST00000415537 SLC9A2Q9UBY0 812 aa28.52■■■□□ 2.16
HLA-C-204ENST00000415537 NID2Q14112 1375 aa28.51■■■□□ 2.16
HLA-C-204ENST00000415537 PRPF3O43395 683 aaKnown RBP28.51■■■□□ 2.15
HLA-C-204ENST00000415537 MBTPS1Q14703 1052 aa28.51■■■□□ 2.15
HLA-C-204ENST00000415537 CYP2W1Q8TAV3 490 aa28.51■■■□□ 2.15
HLA-C-204ENST00000415537 LMBR1Q8WVP7 490 aa28.51■■■□□ 2.15
HLA-C-204ENST00000415537 C6orf50Q9HD87 102 aa28.51■■■□□ 2.15
HLA-C-204ENST00000415537 PPP4R2Q9NY27 417 aa28.51■■■□□ 2.15
HLA-C-204ENST00000415537 UNC80Q8N2C7 3258 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 MARK3P27448 753 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 SREBF1P36956 1147 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 JAKMIP3Q5VZ66 844 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 PPM1EQ8WY54 764 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 PHKBQ93100 1093 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 AZI2Q9H6S1 392 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 CYP46A1Q9Y6A2 500 aa28.5■■■□□ 2.15
HLA-C-204ENST00000415537 NFASCO94856 1347 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 CTSHP09668 335 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 ARP10275 920 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 ADAM17P78536 824 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 DEFB103AP81534 67 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 MCTP2Q6DN12 878 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 ZMYND12Q9H0C1 365 aa28.49■■■□□ 2.15
HLA-C-204ENST00000415537 ESYT2A0FGR8 921 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 GNA11P29992 359 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 CCT2P78371 535 aaKnown RBP28.48■■■□□ 2.15
HLA-C-204ENST00000415537 PPFIA1Q13136 1202 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 ADGRE1Q14246 886 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 PKN1Q16512 942 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 TCTN1Q2MV58 587 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 DBF4BQ8NFT6 615 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 ZSWIM6Q9HCJ5 1215 aa28.48■■■□□ 2.15
HLA-C-204ENST00000415537 CHD9Q3L8U1 2897 aa28.47■■■□□ 2.15
HLA-C-204ENST00000415537 MEIS1O00470 390 aa28.47■■■□□ 2.15
HLA-C-204ENST00000415537 PDIA3P30101 505 aaKnown RBP28.47■■■□□ 2.15
HLA-C-204ENST00000415537 TNPO1Q92973 898 aaKnown RBP28.47■■■□□ 2.15
HLA-C-204ENST00000415537 SLC26A6Q9BXS9 759 aa28.47■■■□□ 2.15
HLA-C-204ENST00000415537 RNF26Q9BY78 433 aaPredicted RBP28.47■■■□□ 2.15
HLA-C-204ENST00000415537 CERS4Q9HA82 394 aa28.47■■■□□ 2.15
HLA-C-204ENST00000415537 AGO4Q9HCK5 861 aaKnown RBP28.47■■■□□ 2.15
HLA-C-204ENST00000415537 EVCP57679 992 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 GRIK4Q16099 956 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 PLEKHG4Q58EX7 1191 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 ERICH6BQ5W0A0 696 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 TAF2Q6P1X5 1199 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 NIPA1Q7RTP0 329 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 TMCO2Q7Z6W1 182 aaPredicted RBP28.46■■■□□ 2.15
HLA-C-204ENST00000415537 RSPH3Q86UC2 560 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 REXO1Q8N1G1 1221 aaKnown RBP28.46■■■□□ 2.15
HLA-C-204ENST00000415537 USP38Q8NB14 1042 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 SEPT8Q92599 483 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 MICAL3Q7RTP6 2002 aa28.46■■■□□ 2.15
HLA-C-204ENST00000415537 A0A0C4DFX4 3053 aa28.45■■■□□ 2.15
HLA-C-204ENST00000415537 PPFIA3O75145 1194 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 IFNAR1P17181 557 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 ACTR2P61160 394 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 TAP1Q03518 808 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 CCDC85BQ15834 202 aaPredicted RBP28.45■■■□□ 2.14
HLA-C-204ENST00000415537 NTRK3Q16288 839 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 PLA2G4DQ86XP0 818 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 CCDC148Q8NFR7 591 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 BICD2Q8TD16 824 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 NCOA5Q9HCD5 579 aaKnown RBP28.45■■■□□ 2.14
HLA-C-204ENST00000415537 TUBE1Q9UJT0 475 aa28.45■■■□□ 2.14
HLA-C-204ENST00000415537 GJB5O95377 273 aa28.44■■■□□ 2.14
HLA-C-204ENST00000415537 AMHP03971 560 aa28.44■■■□□ 2.14
HLA-C-204ENST00000415537 ITGB3BPQ13352 177 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-204ENST00000415537 TOB2Q14106 344 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-204ENST00000415537 ARNTL2Q8WYA1 636 aa28.44■■■□□ 2.14
HLA-C-204ENST00000415537 RAD9AQ99638 391 aa28.44■■■□□ 2.14
HLA-C-204ENST00000415537 TM6SF1Q9BZW5 370 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms