RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 PALM3A6NDB9 673 aaPredicted RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 H7C1D1 291 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 ALOX15P16050 662 aaPredicted RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 HIRAP54198 1017 aaPredicted RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 MRPS35P82673 323 aaKnown RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 SGSM1Q2NKQ1 1148 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 SH3BP5LQ7L8J4 393 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 HOOK3Q86VS8 718 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 VSTM4Q8IW00 320 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 SLC44A5Q8NCS7 719 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 EHBP1Q8NDI1 1231 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 NEK9Q8TD19 979 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 WHAMMQ8TF30 809 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 IDI2Q9BXS1 227 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 ARPP21Q9UBL0 812 aaPredicted RBP22.34■■□□□ 1.17
AP1S3-205ENST00000415298 MYH1P12882 1939 aa22.34■■□□□ 1.17
AP1S3-205ENST00000415298 FOCADQ5VW36 1801 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 DDTLA6NHG4 134 aaPredicted RBP22.33■■□□□ 1.17
AP1S3-205ENST00000415298 B4E1Z4 1266 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 SBK1Q52WX2 424 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 KDM7AQ6ZMT4 941 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 MPHOSPH6Q99547 160 aaKnown RBP22.33■■□□□ 1.17
AP1S3-205ENST00000415298 LAMA4Q16363 1823 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 NAV1Q8NEY1 1877 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 TMCC1O94876 653 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 UPP2O95045 317 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 GHRP10912 638 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 POLE2P56282 527 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 SPDYE2Q495Y8 402 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 CDAN1Q8IWY9 1227 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 ERMNQ8TAM6 284 aa22.33■■□□□ 1.17
AP1S3-205ENST00000415298 MOV10L1Q9BXT6 1211 aaKnown RBP22.33■■□□□ 1.17
AP1S3-205ENST00000415298 ZNHIT6Q9NWK9 470 aaKnown RBP22.33■■□□□ 1.17
AP1S3-205ENST00000415298 PHEXP78562 749 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 GOLGA8FQ08AF8 430 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 GOLGA8DPQ0D2H9 430 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 BLOC1S2Q6QNY1 142 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 GDAP1L1Q96MZ0 367 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 OCEL1Q9H607 264 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 MRPL44Q9H9J2 332 aaKnown RBP22.32■■□□□ 1.16
AP1S3-205ENST00000415298 MAP3K13O43283 966 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 CCDC175P0C221 793 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 KRT32Q14532 448 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 KLHL10Q6JEL2 608 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 MFSD6Q6ZSS7 791 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 SEPT14Q6ZU15 432 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 CCDC65Q8IXS2 484 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 ATRIPQ8WXE1 791 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 NDNQ99608 321 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 TM6SF1Q9BZW5 370 aa22.32■■□□□ 1.16
AP1S3-205ENST00000415298 FAM200BP0CF97 657 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 STIP1P31948 543 aaKnown RBP22.31■■□□□ 1.16
AP1S3-205ENST00000415298 EMC10Q5UCC4 262 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 AGAP11Q8TF27 550 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 CYFIP2Q96F07 1278 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 DMAP1Q9NPF5 467 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-205ENST00000415298 CYP46A1Q9Y6A2 500 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 GFPT2O94808 682 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 PSMA5P28066 241 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 HDAC4P56524 1084 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 PPP1R7Q15435 360 aa22.31■■□□□ 1.16
AP1S3-205ENST00000415298 ZSCAN29Q8IWY8 852 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-205ENST00000415298 GPHNQ9NQX3 736 aaPredicted RBP22.31■■□□□ 1.16
AP1S3-205ENST00000415298 CLTAP09496 248 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CCDC166P0CW27 439 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 RPS6KB1P23443 525 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 UBASH3AP57075 661 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 ADAM9Q13443 819 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CLPPQ16740 277 aaPredicted RBP22.3■■□□□ 1.16
AP1S3-205ENST00000415298 TTMPQ5BVD1 217 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 ALS2CLQ60I27 953 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 NCCRP1Q6ZVX7 275 aaPredicted RBP22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CYB5R4Q7L1T6 521 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 NCOA7Q8NI08 942 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 GLTPD2A6NH11 291 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 FAM196BA6NMK8 535 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 ATP1A2P50993 1020 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CCNG1P51959 295 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CCDC73Q6ZRK6 1079 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 MAATS1Q7Z4T9 603 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 ERICH1Q86X53 443 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 TMEM39BQ9GZU3 492 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 ZSWIM5Q9P217 1185 aa22.3■■□□□ 1.16
AP1S3-205ENST00000415298 CCND1P24385 295 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 ANTXR2P58335 489 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 PSMC1P62191 440 aaKnown RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 ZNF569Q5MCW4 686 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 MB21D2Q8IYB1 491 aaPredicted RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 OXCT2Q9BYC2 517 aaPredicted RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 HACL1Q9UJ83 578 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 RABL2BQ9UNT1 228 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 DDX60LQ5H9U9 1706 aaKnown RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 CNTNAP1P78357 1384 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 SEC24CP53992 1094 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 BPIFB4P59827 614 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 NCAPHQ15003 741 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 NAF1Q96HR8 494 aaKnown RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 RNPC3Q96LT9 517 aaKnown RBP22.29■■□□□ 1.16
AP1S3-205ENST00000415298 ZKSCAN3Q9BRR0 538 aa22.29■■□□□ 1.16
AP1S3-205ENST00000415298 TMOD2Q9NZR1 351 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms