RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 TMEM265A0A087WTH1 108 aa18.42■□□□□ 0.54
DDR1-230ENST00000412274 SELPP16109 830 aa18.42■□□□□ 0.54
DDR1-230ENST00000412274 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
DDR1-230ENST00000412274 C16orf59Q7L2K0 433 aa18.42■□□□□ 0.54
DDR1-230ENST00000412274 BLIDQ8IZY5 108 aa18.42■□□□□ 0.54
DDR1-230ENST00000412274 UMODL1Q5DID0 1318 aa18.42■□□□□ 0.54
DDR1-230ENST00000412274 IGLV3-22A0A075B6J6 115 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 GSTTP1A0A1W2PQM5 241 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 LGR5O75473 907 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 ATG7O95352 703 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 ARP10275 920 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 SP4Q02446 784 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 PLPPR4Q7Z2D5 763 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 SERINC5Q86VE9 423 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 CYP2W1Q8TAV3 490 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 GLG1Q92896 1179 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 ATP6V0A1Q93050 837 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 GTF3C6Q969F1 213 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 CTAGE1Q96RT6 745 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 RNPEPQ9H4A4 650 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 PCDH10Q9P2E7 1040 aa18.41■□□□□ 0.54
DDR1-230ENST00000412274 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 FAM86B1E9PN63 330 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 IPO5O00410 1097 aaKnown RBP18.4■□□□□ 0.54
DDR1-230ENST00000412274 FAM86B2P0C5J1 330 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 ACRP10323 421 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 CKBP12277 381 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 LRRC8DQ7L1W4 858 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 KRT25Q7Z3Z0 450 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 SCLYQ96I15 445 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 ZNF577Q9BSK1 485 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
DDR1-230ENST00000412274 LAMA3Q16787 3333 aa18.39■□□□□ 0.54
DDR1-230ENST00000412274 EFCAB14O75071 495 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 PPFIA3O75145 1194 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 BAIAP3O94812 1187 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 ACTR2P61160 394 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 KRT76Q01546 638 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 ME3Q16798 604 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 FAM160B1Q5W0V3 765 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 ZNF746Q6NUN9 644 aaPredicted RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 MOXD1Q6UVY6 613 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 SMAP1Q8IYB5 467 aaPredicted RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 ZSCAN31Q96LW9 406 aaPredicted RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 NAP1L4Q99733 375 aaKnown RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 PHF20Q9BVI0 1012 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 BRMS1Q9HCU9 246 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 PKD2L1Q9P0L9 805 aa18.39■□□□□ 0.53
DDR1-230ENST00000412274 ORC3Q9UBD5 711 aaPredicted RBP18.39■□□□□ 0.53
DDR1-230ENST00000412274 DOCK5Q9H7D0 1870 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 M0R2N6 131 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 CYP3A7P24462 503 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 STAT5BP51692 787 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 ADAM17P78536 824 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 ITGB3BPQ13352 177 aaPredicted RBP18.38■□□□□ 0.53
DDR1-230ENST00000412274 NONOQ15233 471 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-230ENST00000412274 PRR16Q569H4 304 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 MIS18BP1Q6P0N0 1132 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 TAF2Q6P1X5 1199 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 RPAINQ86UA6 219 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 RSPH3Q86UC2 560 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 DEFB123Q8N688 67 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 TBCKQ8TEA7 893 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 DHX38Q92620 1227 aaKnown RBP18.38■□□□□ 0.53
DDR1-230ENST00000412274 FTOQ9C0B1 505 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDR1-230ENST00000412274 SLC4A7Q9Y6M7 1214 aa18.38■□□□□ 0.53
DDR1-230ENST00000412274 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 IGKV6D-21A0A0A0MT36 114 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 CXCL10P02778 98 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 RAB30Q15771 203 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 TRIM71Q2Q1W2 868 aaKnown RBP18.37■□□□□ 0.53
DDR1-230ENST00000412274 Q4G0T1 1027 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 ABHD15Q6UXT9 468 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 DEFB128Q7Z7B8 93 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 RASGRP4Q8TDF6 673 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 RIT2Q99578 217 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 LLPHQ9BRT6 129 aaKnown RBP18.37■□□□□ 0.53
DDR1-230ENST00000412274 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
DDR1-230ENST00000412274 SETD4Q9NVD3 440 aa18.37■□□□□ 0.53
DDR1-230ENST00000412274 CCDC194A0A1B0GVG4 234 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 RSPH10B2B2RC85 870 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 DHX15O43143 795 aaKnown RBP18.36■□□□□ 0.53
DDR1-230ENST00000412274 TREHO43280 583 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 CTDNEP1O95476 244 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 RSPH10BP0C881 870 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 ZNF200P98182 395 aaPredicted RBP18.36■□□□□ 0.53
DDR1-230ENST00000412274 PPFIA1Q13136 1202 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 TRIM29Q14134 588 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 FAM43BQ6ZT52 329 aaPredicted RBP18.36■□□□□ 0.53
DDR1-230ENST00000412274 LMBR1Q8WVP7 490 aa18.36■□□□□ 0.53
DDR1-230ENST00000412274 PCDHA10Q9Y5I2 948 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms