RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 AGO4Q9HCK5 861 aaKnown RBP21.77■■□□□ 1.08
SF3A1-202ENST00000411423 SETD4Q9NVD3 440 aa21.77■■□□□ 1.08
SF3A1-202ENST00000411423 GBF1Q92538 1859 aa21.77■■□□□ 1.08
SF3A1-202ENST00000411423 IGLV3-22A0A075B6J6 115 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 C17orf102A2RUQ5 167 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 RFC2P35250 354 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 ADAM17P78536 824 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 ZNF618Q5T7W0 954 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 SERINC5Q86VE9 423 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 GIMAP8Q8ND71 665 aaPredicted RBP21.76■■□□□ 1.07
SF3A1-202ENST00000411423 AFAP1L1Q8TED9 768 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 SEPT1Q8WYJ6 367 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 OSBPL7Q9BZF2 842 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 GLT8D2Q9H1C3 349 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 C6orf50Q9HD87 102 aa21.76■■□□□ 1.07
SF3A1-202ENST00000411423 MAFGO15525 162 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 CYP3A4P08684 503 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 SELPP16109 830 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 AK2P54819 239 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 ANAPC15P60006 121 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 AKAP17AQ02040 695 aaKnown RBP21.75■■□□□ 1.07
SF3A1-202ENST00000411423 NPY5RQ15761 445 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 ATP6V0A1Q93050 837 aa21.75■■□□□ 1.07
SF3A1-202ENST00000411423 YBX2Q9Y2T7 364 aaKnown RBP21.75■■□□□ 1.07
SF3A1-202ENST00000411423 LARGE1O95461 756 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 PFKMP08237 780 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 MARK3P27448 753 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 RABGGTBP53611 331 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 SSRP1Q08945 709 aaKnown RBP21.74■■□□□ 1.07
SF3A1-202ENST00000411423 REXO1Q8N1G1 1221 aaKnown RBP21.74■■□□□ 1.07
SF3A1-202ENST00000411423 CCDC155Q8N6L0 562 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 CDX2Q99626 313 aaPredicted RBP21.74■■□□□ 1.07
SF3A1-202ENST00000411423 JPH1Q9HDC5 661 aaPredicted RBP21.74■■□□□ 1.07
SF3A1-202ENST00000411423 SLC9A2Q9UBY0 812 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 STXBP5LQ9Y2K9 1186 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 NFASCO94856 1347 aa21.74■■□□□ 1.07
SF3A1-202ENST00000411423 PTPRSQ13332 1948 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 ZBBXA8MT70 800 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 DHX15O43143 795 aaKnown RBP21.73■■□□□ 1.07
SF3A1-202ENST00000411423 LGR5O75473 907 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 CTDNEP1O95476 244 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 CCNE2O96020 404 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 CXCL10P02778 98 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 MYOGP15173 224 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 CCDC12Q8WUD4 166 aaPredicted RBP21.73■■□□□ 1.07
SF3A1-202ENST00000411423 LMBR1Q8WVP7 490 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 TIFAQ96CG3 184 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 ZBTB10Q96DT7 871 aa21.73■■□□□ 1.07
SF3A1-202ENST00000411423 FTOQ9C0B1 505 aaKnown RBP eCLIP21.73■■□□□ 1.07
SF3A1-202ENST00000411423 CHD7Q9P2D1 2997 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 ACTR2P61160 394 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 GRIN2CQ14957 1233 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 NIPA1Q7RTP0 329 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 PLA2G4DQ86XP0 818 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 MYLIPQ8WY64 445 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 SH3GLB2Q9NR46 395 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 ZNF215Q9UL58 517 aaPredicted RBP21.72■■□□□ 1.07
SF3A1-202ENST00000411423 SLC4A7Q9Y6M7 1214 aa21.72■■□□□ 1.07
SF3A1-202ENST00000411423 M0R2N6 131 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 DDX39AO00148 427 aaKnown RBP21.71■■□□□ 1.07
SF3A1-202ENST00000411423 PFKFB2O60825 505 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 GNA11P29992 359 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 ZNF76P36508 570 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 THPOP40225 353 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 C8orf34Q49A92 452 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 RUFY4Q6ZNE9 571 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 CCDC148Q8NFR7 591 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 LENG9Q96B70 501 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 MTIF3Q9H2K0 278 aaKnown RBP21.71■■□□□ 1.07
SF3A1-202ENST00000411423 NKX2-4Q9H2Z4 354 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 GJB4Q9NTQ9 266 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 EMSYQ7Z589 1322 aa21.71■■□□□ 1.07
SF3A1-202ENST00000411423 TMEM265A0A087WTH1 108 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 CPLX1O14810 134 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 ATG7O95352 703 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 DEXIO95424 95 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 NLRP5P59047 1200 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 MARCH8Q5T0T0 291 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 TMCO2Q7Z6W1 182 aaPredicted RBP21.7■■□□□ 1.06
SF3A1-202ENST00000411423 TRIM22Q8IYM9 498 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 SDF4Q9BRK5 362 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 SLKQ9H2G2 1235 aaPredicted RBP21.7■■□□□ 1.06
SF3A1-202ENST00000411423 ZNF576Q9H609 170 aa21.7■■□□□ 1.06
SF3A1-202ENST00000411423 ARHGEF15O94989 841 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 ATP2A2P16615 1042 aaKnown RBP21.69■■□□□ 1.06
SF3A1-202ENST00000411423 CIITAP33076 1130 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 ME3Q16798 604 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 NECAB1Q8N987 351 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 GLG1Q92896 1179 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 SMARCAD1Q9H4L7 1026 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 ERAP1Q9NZ08 941 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 PCDHA4Q9UN74 947 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 KCNJ14Q9UNX9 436 aa21.69■■□□□ 1.06
SF3A1-202ENST00000411423 IGKV6D-21A0A0A0MT36 114 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 CTSHP09668 335 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 ACTN1P12814 892 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 DEFB103AP81534 67 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 ST3GAL1Q11201 340 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 PPFIA1Q13136 1202 aa21.68■■□□□ 1.06
SF3A1-202ENST00000411423 GRIK4Q16099 956 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms