RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NUDT5Q9UKK9 219 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 CROCCQ5TZA2 2017 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 PRR36Q9H6K5 1346 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 ADAMTS9Q9P2N4 1935 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 CENPVL1A0A0U1RR11 272 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ENDOUP21128 410 aaKnown RBP-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 CACNA2D1P54289 1103 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 IRF9Q00978 393 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ASIC2Q16515 512 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 PDZD3Q86UT5 571 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 CCNJLQ8IV13 435 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ANKRD35Q8N283 1001 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 SPRYD3Q8NCJ5 442 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 NUDT10Q8NFP7 164 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 NUDT11Q96G61 164 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ACSBG1Q96GR2 724 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 AJUBAQ96IF1 538 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZSWIM3Q96MP5 696 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 SPRTNQ9H040 489 aaPredicted RBP-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 KLK15Q9H2R5 256 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 CHRDQ9H2X0 955 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF576Q9H609 170 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 MLXIPLQ9NP71 852 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 CROTQ9UKG9 612 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ICAM5Q9UMF0 924 aa-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 ATXN2Q99700 1313 aaKnown RBP-0.43□□□□□ -2.48
RNU4-88P-201ENST00000411220 LZTS3O60299 673 aaPredicted RBP-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 SYPP08247 313 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 GLI4P10075 376 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 TACR1P25103 407 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 NPEPPSP55786 919 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 RNF151Q2KHN1 245 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 ENOX1Q8TC92 643 aaKnown RBP-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 GPBAR1Q8TDU6 330 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 SYTL5Q8TDW5 730 aaPredicted RBP-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 WRNIP1Q96S55 665 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 ARPP21Q9UBL0 812 aaPredicted RBP-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 KIAA1024Q9UPX6 916 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 COL7A1Q02388 2944 aa-0.44□□□□□ -2.48
RNU4-88P-201ENST00000411220 LRRN2O75325 713 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 KLHL18O94889 574 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 ESRRBO95718 433 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 IGFBP4P22692 258 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 SLC6A11P48066 632 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 LIG3P49916 1009 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRTAP10-10P60014 251 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRT32Q14532 448 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF672Q499Z4 452 aaPredicted RBP-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 CAPRIN2Q6IMN6 1127 aaKnown RBP-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 CABP7Q86V35 215 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 HID1Q8IV36 788 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 PARP9Q8IXQ6 854 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 DNAJB8Q8NHS0 232 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 GPR152Q8TDT2 470 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 TCTN2Q96GX1 697 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRTAP2-1Q9BYU5 128 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 CAAP1Q9H8G2 361 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 FAT4Q6V0I7 4981 aa-0.45□□□□□ -2.48
RNU4-88P-201ENST00000411220 MATN2O00339 956 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 WNT9AO14904 365 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 SLC28A2O43868 658 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 LAG3P18627 525 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRT9P35527 623 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 SIM1P81133 766 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 MAP3K12Q12852 859 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 USP10Q14694 798 aaKnown RBP-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 LLGL1Q15334 1064 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 ADAM5Q6NVV9 412 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 IGFL3Q6UXB1 125 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 DGLUCYQ7Z3D6 616 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 IRF2BP2Q7Z5L9 587 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 NEK8Q86SG6 692 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 TRIM50Q86XT4 487 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 JAMLQ86YT9 394 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 DAGLBQ8NCG7 672 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 VTI1AQ96AJ9 217 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 HDAC8Q9BY41 377 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 ASCC2Q9H1I8 757 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 NELFAQ9H3P2 528 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 AGO3Q9H9G7 860 aaKnown RBP-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 XDHP47989 1333 aa-0.46□□□□□ -2.48
RNU4-88P-201ENST00000411220 KAT6AQ92794 2004 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 CD8B2A6NJW9 211 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 SOCS2O14508 198 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 EREGO14944 169 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRTAP2-3P0C7H8 128 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 MMP13P45452 471 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 RARRES1P49788 294 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 CORO7P57737 925 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF169Q14929 603 aaPredicted RBP-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 LRRC41Q15345 812 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 FCN2Q15485 313 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 PXDC1Q5TGL8 231 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 MAP1SQ66K74 1059 aaPredicted RBP-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 REXO1L1PQ8IX06 675 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF655Q8N720 491 aaPredicted RBP-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 NETO2Q8NC67 525 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 STAG1Q8WVM7 1258 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 MPHOSPH9Q99550 1183 aa-0.47□□□□□ -2.48
RNU4-88P-201ENST00000411220 KRTAP2-4Q9BYR9 128 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms