RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 GGPS1O95749 300 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 GLP2RO95838 553 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 CFBP00751 764 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 LMNAP02545 664 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 CHRNA1P02708 482 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 LGALS2P05162 132 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 RPLP2P05387 115 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 FGRP09769 529 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 GOLGA8HP0CJ92 632 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SNHG28P0DPA3 235 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 MYCLP12524 364 aaPredicted RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 UBA1P22314 1058 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SP100P23497 879 aaPredicted RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 DNAJB1P25685 340 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TECP42680 631 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 CLCN5P51795 746 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 NEDD9Q14511 834 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 CDC37Q16543 378 aaPredicted RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 DUSP6Q16828 381 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TPRNQ4KMQ1 711 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SPOUT1Q5T280 376 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 IER5Q5VY09 327 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PDE12Q6L8Q7 609 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 CES5AQ6NT32 575 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 ANKRD54Q6NXT1 300 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TMEM184AQ6ZMB5 413 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 FAM43BQ6ZT52 329 aaPredicted RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 VSIG10LQ86VR7 867 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 NPAS4Q8IUM7 802 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SIRT2Q8IXJ6 389 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 KIAA2013Q8IYS2 634 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PLCD3Q8N3E9 789 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SAMD3Q8N6K7 520 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TBC1D5Q92609 795 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZNF689Q96CS4 500 aaPredicted RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 NECTIN4Q96NY8 510 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 HINFPQ9BQA5 517 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 RTP3Q9BQQ7 232 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PDCD2LQ9BRP1 358 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 FTHL17Q9BXU8 183 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 OSBPL7Q9BZF2 842 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 UBA5Q9GZZ9 404 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 S1PR5Q9H228 398 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 EHMT1Q9H9B1 1298 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 RC3H2Q9HBD1 1191 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PXMP2Q9NR77 195 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TSHZ2Q9NRE2 1034 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 AAASQ9NRG9 546 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 TCP11L1Q9NUJ3 509 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 DLL3Q9NYJ7 618 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 MAP3K20Q9NYL2 800 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 COL20A1Q9P218 1284 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PUF60Q9UHX1 559 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 ANAPC4Q9UJX5 808 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 DDX19BQ9UMR2 479 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 SORCS3Q9UPU3 1222 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPL11Q9Y3B7 192 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCDHB12Q9Y5F1 795 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCDHGC5Q9Y5F6 944 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 MRPL42Q9Y6G3 142 aaKnown RBP2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 PARP14Q460N5 1801 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 BAHCC1Q9P281 2608 aa2.76□□□□□ -1.97
RNU4-53P-201ENST00000410828 MYO5AQ9Y4I1 1855 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCDC171Q6TFL3 1326 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ZFYVE26Q68DK2 2539 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 MICAL3Q7RTP6 2002 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CHD6Q8TD26 2715 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ANKRD11Q6UB99 2663 aaPredicted RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 C2CD4DB7Z1M9 353 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 M0QZ92 97 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 FSCN2O14926 492 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 FOXP2O15409 715 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SMARCA5O60264 1052 aaPredicted RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 FGF18O76093 207 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PCP11498 1178 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SCG2P13521 617 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 AOC1P19801 751 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SDHBP21912 280 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 MTHFRP42898 656 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 NT5C2P49902 561 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 HSD17B4P51659 736 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ERVFC1P60507 584 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ADAM17P78536 824 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ARHGAP4P98171 946 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 RBM10P98175 930 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 SP2Q02086 613 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 GHRHRQ02643 423 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ITIH3Q06033 890 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 MGAT3Q09327 533 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 TRAF1Q13077 416 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PPFIA1Q13136 1202 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 BMS1Q14692 1282 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 LPIN1Q14693 890 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PGM5Q15124 567 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ANGPT1Q15389 498 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 ALX1Q15699 326 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 QRICH1Q2TAL8 776 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 GNPTABQ3T906 1256 aa2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 PAN2Q504Q3 1202 aaKnown RBP2.75□□□□□ -1.97
RNU4-53P-201ENST00000410828 CCDC178Q5BJE1 867 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms