RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZBBXA8MT70 800 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 MEIS1O00470 390 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 TREHO43280 583 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 NBNO60934 754 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 ARHGAP4P98171 946 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 ZNF618Q5T7W0 954 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 CRYGNQ8WXF5 182 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 SEPT1Q8WYJ6 367 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 ATP6V0A1Q93050 837 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 ZNF576Q9H609 170 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 C6orf50Q9HD87 102 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 SETD4Q9NVD3 440 aa20.22■□□□□ 0.83
LSM5-204ENST00000409909 RABGGTBP53611 331 aa20.21■□□□□ 0.83
LSM5-204ENST00000409909 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 ITGB3BPQ13352 177 aaPredicted RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 MBTPS1Q14703 1052 aa20.21■□□□□ 0.83
LSM5-204ENST00000409909 GRIN2CQ14957 1233 aa20.21■□□□□ 0.83
LSM5-204ENST00000409909 TCTN1Q2MV58 587 aa20.21■□□□□ 0.83
LSM5-204ENST00000409909 CCDC12Q8WUD4 166 aaPredicted RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 MYLIPQ8WY64 445 aa20.21■□□□□ 0.83
LSM5-204ENST00000409909 AGO4Q9HCK5 861 aaKnown RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 YBX2Q9Y2T7 364 aaKnown RBP20.21■□□□□ 0.83
LSM5-204ENST00000409909 FAM86B1E9PN63 330 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 CXCL10P02778 98 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 FAM86B2P0C5J1 330 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 ACTN1P12814 892 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 ATP2A2P16615 1042 aaKnown RBP20.2■□□□□ 0.82
LSM5-204ENST00000409909 ADAM17P78536 824 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 STK3Q13188 491 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 REXO1Q8N1G1 1221 aaKnown RBP20.2■□□□□ 0.82
LSM5-204ENST00000409909 JPH1Q9HDC5 661 aaPredicted RBP20.2■□□□□ 0.82
LSM5-204ENST00000409909 VPS54Q9P1Q0 977 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 SLC9A2Q9UBY0 812 aa20.2■□□□□ 0.82
LSM5-204ENST00000409909 CYP3A4P08684 503 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 MYOGP15173 224 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 THPOP40225 353 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 RAB30Q15771 203 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 NIPA1Q7RTP0 329 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 RASGRP4Q8TDF6 673 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 LMBR1Q8WVP7 490 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 PCYT2Q99447 389 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 NKX2-4Q9H2Z4 354 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 MSRAQ9UJ68 235 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 MYO9BQ13459 2157 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 NFASCO94856 1347 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 TRANK1O15050 2925 aa20.19■□□□□ 0.82
LSM5-204ENST00000409909 IGLV3-22A0A075B6J6 115 aa20.18■□□□□ 0.82
LSM5-204ENST00000409909 PARNO95453 639 aaKnown RBP20.18■□□□□ 0.82
LSM5-204ENST00000409909 GNA11P29992 359 aa20.18■□□□□ 0.82
LSM5-204ENST00000409909 ZNF76P36508 570 aa20.18■□□□□ 0.82
LSM5-204ENST00000409909 ANAPC15P60006 121 aa20.18■□□□□ 0.82
LSM5-204ENST00000409909 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
LSM5-204ENST00000409909 GLG1Q92896 1179 aa20.18■□□□□ 0.82
LSM5-204ENST00000409909 KAT6AQ92794 2004 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 LGR5O75473 907 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 SEC24BO95487 1268 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 GNAT1P11488 350 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 MARK3P27448 753 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 ACTR2P61160 394 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 MCTP2Q6DN12 878 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 UIMC1Q96RL1 719 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 SDF4Q9BRK5 362 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 SMARCAD1Q9H4L7 1026 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 ERAP1Q9NZ08 941 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 TPCN1Q9ULQ1 816 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 PCDHA11Q9Y5I1 949 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 NRCAMQ92823 1304 aa20.17■□□□□ 0.82
LSM5-204ENST00000409909 RSPH10B2B2RC85 870 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 CPLX1O14810 134 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 DHX15O43143 795 aaKnown RBP20.16■□□□□ 0.82
LSM5-204ENST00000409909 EDIL3O43854 480 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 BAIAP3O94812 1187 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 CCNE2O96020 404 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 RSPH10BP0C881 870 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 CNKSR3Q6P9H4 555 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 PLA2G4DQ86XP0 818 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 TRIM22Q8IYM9 498 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 CCDC148Q8NFR7 591 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 PHOSPHO2Q8TCD6 241 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 IL17RAQ96F46 866 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 AIFM3Q96NN9 605 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 OSBPL7Q9BZF2 842 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
LSM5-204ENST00000409909 ATG7O95352 703 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 WDR5P61964 334 aaKnown RBP20.15■□□□□ 0.82
LSM5-204ENST00000409909 SCRN1Q12765 414 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 PPFIA1Q13136 1202 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 MARCH8Q5T0T0 291 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 RUFY4Q6ZNE9 571 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 SLC17A8Q8NDX2 589 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 SLC28A3Q9HAS3 691 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 PTPRSQ13332 1948 aa20.15■□□□□ 0.82
LSM5-204ENST00000409909 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.81
LSM5-204ENST00000409909 DTNBO60941 627 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 DEXIO95424 95 aa20.14■□□□□ 0.81
LSM5-204ENST00000409909 CTSHP09668 335 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 258.5 ms