RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 NELFBQ8WX92 580 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CRYGNQ8WXF5 182 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 LARP4BQ92615 738 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 THAP9Q9H5L6 903 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 VCPKMTQ9H867 229 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 KCNMB3Q9NPA1 279 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 EXOC1Q9NV70 894 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 INTS13Q9NVM9 706 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 ADD3Q9UEY8 706 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 PCDHA12Q9UN75 941 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 CTNND2Q9UQB3 1225 aa8.38□□□□□ -1.07
CXCR4-202ENST00000409817 FCF1Q9Y324 198 aaKnown RBP8.38□□□□□ -1.07
CXCR4-202ENST00000409817 MYH7BA7E2Y1 1941 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 A0A1W2PRG0 241 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 WNT10BO00744 389 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 ARHGAP6O43182 974 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 STX10O60499 249 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 SLURP2P0DP57 97 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 CIITAP33076 1130 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 SREBF1P36956 1147 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 CAP2P40123 477 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 PRCPP42785 496 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 PSMD2Q13200 908 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 GRB10Q13322 594 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 TRIM14Q14142 442 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 LINC01559Q495D7 138 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 Q4G0T1 1027 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 TMEM119Q4V9L6 283 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 HAUS3Q68CZ6 603 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 UNC13DQ70J99 1090 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 FAM114A1Q8IWE2 563 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 MYRIPQ8NFW9 859 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 SNX29Q8TEQ0 813 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 ZNF592Q92610 1267 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 HAS1Q92839 578 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 CCDC51Q96ER9 411 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 FAM20AQ96MK3 541 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 NAA15Q9BXJ9 866 aaKnown RBP8.37□□□□□ -1.07
CXCR4-202ENST00000409817 EHMT1Q9H9B1 1298 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 VEZTQ9HBM0 779 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 MYOZ2Q9NPC6 264 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 PRR12Q9ULL5 1215 aa8.37□□□□□ -1.07
CXCR4-202ENST00000409817 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.37□□□□□ -1.07
CXCR4-202ENST00000409817 GOLGA6L9A6NEM1 432 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 DYNC1I1O14576 645 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 DKK1O94907 266 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 CYP3A4P08684 503 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 TPM1P09493 284 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PBX1P40424 430 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 STX17P56962 302 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 ASIC1P78348 528 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 JAG1P78504 1218 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 ARHGAP4P98171 946 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PTPN14Q15678 1187 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 SHROOM1Q2M3G4 852 aaPredicted RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 USP17L6PQ6QN14 398 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 SMYD4Q8IYR2 804 aaPredicted RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 ZNF511Q8NB15 262 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 ERMNQ8TAM6 284 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 RAD54LQ92698 747 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PANX2Q96RD6 677 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 RANBP17Q9H2T7 1088 aaKnown RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 BLOC1S4Q9NUP1 217 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PGAP2Q9UHJ9 254 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 FEM1BQ9UK73 627 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 ZSCAN12O43309 604 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 FGFR1OPO95684 399 aaKnown RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 TNNT1P13805 278 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 CCNE1P24864 410 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 MAP7D1Q3KQU3 841 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 TCP11X2Q5H9J9 407 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PPFIBP1Q86W92 1011 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 CNGA4Q8IV77 575 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 LPAR1Q92633 364 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 HOOK2Q96ED9 719 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 PNMA5Q96PV4 448 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 TMEM39BQ9GZU3 492 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 DEFB129Q9H1M3 183 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 GDAQ9Y2T3 454 aa8.36□□□□□ -1.07
CXCR4-202ENST00000409817 MRPL11Q9Y3B7 192 aaKnown RBP8.36□□□□□ -1.07
CXCR4-202ENST00000409817 UQCRHLA0A096LP55 91 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 A0A1W2PQC6 194 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 KCNJ18B7U540 433 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 AKR1B15C9JRZ8 316 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 N4BP3O15049 544 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 LZTS3O60299 673 aaPredicted RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 ZBTB7AO95365 584 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 UQCRHP07919 91 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 COPB1P53618 953 aaKnown RBP8.35□□□□□ -1.07
CXCR4-202ENST00000409817 KCNJ12Q14500 433 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 KRT31Q15323 416 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 TTI2Q6NXR4 508 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 SAMD3Q8N6K7 520 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 LRRC15Q8TF66 581 aa8.35□□□□□ -1.07
CXCR4-202ENST00000409817 P2RX5Q93086 422 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms