RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 FANCLQ9NW38 375 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 WRAP73Q9P2S5 460 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-203ENST00000409458 DNM3Q9UQ16 869 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 NFE2L3Q9Y4A8 694 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 NPHP3-ACAD11A0A0J9YXS1 232 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 PVALEFA0A1B0GWK0 134 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 STAM2O75886 525 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 ATP1A3P13637 1013 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 KCNA2P16389 499 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 TPH2Q8IWU9 490 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 ADSSL1Q8N142 457 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 SYT2Q8N9I0 419 aaPredicted RBP15.69■□□□□ 0.1
GPNMB-203ENST00000409458 BANK1Q8NDB2 785 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 FGD4Q96M96 766 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 MMP19Q99542 508 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 PTPN18Q99952 460 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 LXNQ9BS40 222 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 PORCNQ9H237 461 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 PLXNB2O15031 1838 aa15.69■□□□□ 0.1
GPNMB-203ENST00000409458 PASKQ96RG2 1323 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 COBLO75128 1261 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 EYA4O95677 639 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 CCNE2O96020 404 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 PGK2P07205 417 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 IDEP14735 1019 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 EDNRBP24530 442 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 EHHADHQ08426 723 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 STK4Q13043 487 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 PAK1Q13153 545 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 ARSHQ5FYA8 562 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 ANKRD13CQ8N6S4 541 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 KIAA0895Q8NCT3 520 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 SHCBP1Q8NEM2 672 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 NEK9Q8TD19 979 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 MROH8Q9H579 483 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 EFCC1Q9HA90 598 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 LOXHD1Q8IVV2 1947 aa15.68■□□□□ 0.1
GPNMB-203ENST00000409458 MAFGO15525 162 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 ZNF18P17022 549 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 MUTP22033 750 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 COASYQ13057 564 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 STXBP2Q15833 593 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 WDR78Q5VTH9 848 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 KCTD17Q8N5Z5 321 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 GPRC5AQ8NFJ5 357 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 PIGOQ8TEQ8 1089 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 RWDD2AQ9UIY3 292 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 ZNFX1Q9P2E3 1918 aaKnown RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 DNAJC25-GNG10A0A024R161 153 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 SPATA31C2B4DYI2 1134 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 ZBTB39O15060 712 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 ZNF157P51786 506 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 KRT76Q01546 638 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 RAD51AP2Q09MP3 1159 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 KCTD2Q14681 263 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 GNPTABQ3T906 1256 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 HSP90AA4PQ58FG1 418 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 CDHR1Q96JP9 859 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 PARK7Q99497 189 aaKnown RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 SLC39A2Q9NP94 309 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 SAMSN1Q9NSI8 373 aaKnown RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 ADD3Q9UEY8 706 aaKnown RBP15.67■□□□□ 0.1
GPNMB-203ENST00000409458 SAMM50Q9Y512 469 aa15.67■□□□□ 0.1
GPNMB-203ENST00000409458 WDR81Q562E7 1941 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 EIF3JO75822 258 aaKnown RBP15.66■□□□□ 0.1
GPNMB-203ENST00000409458 JAK3P52333 1124 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 PMS1P54277 932 aaKnown RBP15.66■□□□□ 0.1
GPNMB-203ENST00000409458 FANCCQ00597 558 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 COBLL1Q53SF7 1204 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 SAPCD2Q86UD0 394 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 SPC24Q8NBT2 197 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 TRIM44Q96DX7 344 aaPredicted RBP15.66■□□□□ 0.1
GPNMB-203ENST00000409458 MRFAP1L1Q96HT8 127 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 BCAS3Q9H6U6 928 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 BMP2KQ9NSY1 1161 aaPredicted RBP15.66■□□□□ 0.1
GPNMB-203ENST00000409458 PANK4Q9NVE7 773 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 MORF4L1Q9UBU8 362 aa15.66■□□□□ 0.1
GPNMB-203ENST00000409458 NFASCO94856 1347 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 FRMD3A2A2Y4 597 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 WDR64B1ANS9 1081 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 KRT18P05783 430 aaKnown RBP15.65■□□□□ 0.1
GPNMB-203ENST00000409458 P4HBP07237 508 aaKnown RBP15.65■□□□□ 0.1
GPNMB-203ENST00000409458 CDC25BP30305 580 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 SFNP31947 248 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 ICAM3P32942 547 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 GCLCP48506 637 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-203ENST00000409458 CCNA1P78396 465 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 STIM1Q13586 685 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 GIT2Q14161 759 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 UGCGQ16739 394 aa15.65■□□□□ 0.1
GPNMB-203ENST00000409458 ZNF746Q6NUN9 644 aaPredicted RBP15.65■□□□□ 0.1
GPNMB-203ENST00000409458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms