RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 MYH7BA7E2Y1 1941 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 MARCH6O60337 910 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 NEMFO60524 1076 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 OFD1O75665 1012 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 TXNP10599 105 aaKnown RBP15.09■□□□□ 0.01
LIMS1-204ENST00000409441 CYBAP13498 195 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 CNGA1P29973 690 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 SYKP43405 635 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 SP2Q02086 613 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 PTGDRQ13258 359 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 TTLL4Q14679 1199 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 SLC9C1Q4G0N8 1177 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 TMEM63BQ5T3F8 832 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 CCDC62Q6P9F0 684 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 C4orf32Q8N8J7 132 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 ZNF577Q9BSK1 485 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 PKD2L1Q9P0L9 805 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 FAM184BQ9ULE4 1060 aa15.09■□□□□ 0.01
LIMS1-204ENST00000409441 IPO5O00410 1097 aaKnown RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 ARIH2O95376 493 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 MARCKSP29966 332 aaPredicted RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 CCND3P30281 292 aaPredicted RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 CDC25BP30305 580 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 ZNF75DP51815 510 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 TNFAIP2Q03169 654 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 ZRSR1Q15695 479 aaKnown RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 CALCRLQ16602 461 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 LY6KQ17RY6 165 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 C11orf57Q6ZUT1 292 aaPredicted RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 KRI1Q8N9T8 703 aaKnown RBP15.08■□□□□ 0
LIMS1-204ENST00000409441 ETNPPLQ8TBG4 499 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 HAS1Q92839 578 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 GJA10Q969M2 543 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 MTMR9Q96QG7 549 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 TMEM60Q9H2L4 133 aa15.08■□□□□ 0
LIMS1-204ENST00000409441 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.07■□□□□ 0
LIMS1-204ENST00000409441 TBX3O15119 743 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 SMPD1P17405 629 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 SHC4Q6S5L8 630 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 ZNF579Q8NAF0 562 aaKnown RBP15.07■□□□□ 0
LIMS1-204ENST00000409441 SLC5A5Q92911 643 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 FAM20AQ96MK3 541 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 SENP7Q9BQF6 1050 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 KCNMB3Q9NPA1 279 aa15.07■□□□□ 0
LIMS1-204ENST00000409441 BECN2A8MW95 431 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 SEPT4O43236 478 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 BMP15O95972 392 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 AKR1A1P14550 325 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 KCNA2P16389 499 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 TXKP42681 527 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 NLRP12P59046 1061 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 ITGB3BPQ13352 177 aaPredicted RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 NEDD9Q14511 834 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 HMX1Q9NP08 348 aaPredicted RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 TBC1D22BQ9NU19 505 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 MCM3APO60318 1980 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 LAD1O00515 517 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 DHX15O43143 795 aaKnown RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 ADCY6O43306 1168 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 SORBS3O60504 671 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 OR52Z1P0C646 297 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 UBA1P22314 1058 aaKnown RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 ATP2C1P98194 919 aaPredicted RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 GJC2Q5T442 439 aaPredicted RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 CYFIP1Q7L576 1253 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 SLFN12Q8IYM2 578 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 GIMAP8Q8ND71 665 aaPredicted RBP15.06■□□□□ 0
LIMS1-204ENST00000409441 COPS5Q92905 334 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 RIT2Q99578 217 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 TRIM5Q9C035 493 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 FAM13BQ9NYF5 915 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 PCDHA12Q9UN75 941 aa15.06■□□□□ 0
LIMS1-204ENST00000409441 NKRFO15226 690 aaKnown RBP eCLIP15.05■□□□□ -0
LIMS1-204ENST00000409441 GAS7O60861 476 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 PSMD10O75832 226 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 GGPS1O95749 300 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 MYCP01106 439 aaPredicted RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 PTGS1P23219 599 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 CELF3Q5SZQ8 465 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 LRCH2Q5VUJ6 765 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 DHX40Q8IX18 779 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 DHX37Q8IY37 1157 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 MRFAP1L1Q96HT8 127 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 TTC12Q9H892 705 aaPredicted RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 MLXIPQ9HAP2 919 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 HOOK1Q9UJC3 728 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 TUBE1Q9UJT0 475 aa15.05■□□□□ -0
LIMS1-204ENST00000409441 FBXO2Q9UK22 296 aaPredicted RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 GNEQ9Y223 722 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 SRPRBQ9Y5M8 271 aaKnown RBP15.05■□□□□ -0
LIMS1-204ENST00000409441 DDX39AO00148 427 aaKnown RBP15.04■□□□□ -0
LIMS1-204ENST00000409441 DYNC1LI2O43237 492 aaPredicted RBP15.04■□□□□ -0
LIMS1-204ENST00000409441 GH1P01241 217 aa15.04■□□□□ -0
LIMS1-204ENST00000409441 LAMC2Q13753 1193 aa15.04■□□□□ -0
LIMS1-204ENST00000409441 IL17AQ16552 155 aa15.04■□□□□ -0
LIMS1-204ENST00000409441 DTHD1Q6ZMT9 781 aa15.04■□□□□ -0
LIMS1-204ENST00000409441 MCOLN1Q9GZU1 580 aa15.04■□□□□ -0
LIMS1-204ENST00000409441 UNC93B1Q9H1C4 597 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms