RNA–Protein interactions for RNA: ENST00000409212.5

SH3BP4-203, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3BP4, Length 5,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-203ENST00000409212 KRT31Q15323 416 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 RFX6Q8HWS3 928 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 ALDH8A1Q9H2A2 487 aaPredicted RBP17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 K7ERI5 159 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 EPHB4P54760 987 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 ITKQ08881 620 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 AFF2P51816 1311 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 RCSD1Q6JBY9 416 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 DNAJC24Q6P3W2 148 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 VCXQ9H320 206 aa17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
SH3BP4-203ENST00000409212 GARSP41250 739 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 CACNB3P54284 484 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 FOXO4P98177 505 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 CAPN12Q6ZSI9 719 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 MB21D1Q8N884 522 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 TDRD3Q9H7E2 651 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 MAD1L1Q9Y6D9 718 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 CRB1P82279 1406 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 MYO1EQ12965 1108 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 GRM4Q14833 912 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 ACRBPQ8NEB7 543 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 ZNF233A6NK53 670 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 HEXIM1O94992 359 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 DDIT3P35638 169 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 ATP1A2P50993 1020 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 ZSCAN26Q16670 478 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 RSRC2Q7L4I2 434 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 NRKQ7Z2Y5 1582 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 ZBTB24O43167 697 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 YWHAGP61981 247 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 PRPSAP1Q14558 356 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 RPS6KA2Q15349 733 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 SARM1Q6SZW1 724 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 EEPD1Q7L9B9 569 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 NLRP7Q8WX94 980 aa17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 NXF1Q9UBU9 619 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-203ENST00000409212 SOWAHDA6NJG2 315 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 NBPF26B4DH59 902 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 SGO2Q562F6 1265 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 NBPF10Q6P3W6 841 aaKnown RBP17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 BBS5Q8N3I7 341 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 NBPF15Q8N660 670 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 SLC10A4Q96EP9 437 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 GJB4Q9NTQ9 266 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 SYNJ2BP-COX16A0A087WUM0 186 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 PVALEFA0A1B0GWK0 134 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 GSG1L2A8MUP6 293 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 GOLGA8SH3BPF8 625 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 ECE2O60344 883 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 LDHAP00338 332 aaKnown RBP17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 COX16Q9P0S2 106 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 SGK1O00141 431 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 TSGA10IPQ3SY00 556 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 MCPH1Q8NEM0 835 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■□□□□ 9.5
SH3BP4-203ENST00000409212 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 IPO11Q9UI26 975 aaKnown RBP17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 PNPLA7Q6ZV29 1317 aa17.21■□□□□ 0.35
SH3BP4-203ENST00000409212 ATP1A3P13637 1013 aa17.21■□□□□ 0.34
SH3BP4-203ENST00000409212 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.34
SH3BP4-203ENST00000409212 PROM2Q8N271 834 aa17.21■□□□□ 0.34
SH3BP4-203ENST00000409212 CEP95Q96GE4 821 aa17.21■□□□□ 0.34
SH3BP4-203ENST00000409212 BUB1BO60566 1050 aaPredicted RBP17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 ECEL1O95672 775 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 TBC1D22BQ9NU19 505 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 ORC4O43929 436 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 BCAS4Q8TDM0 211 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 TCP11Q8WWU5 503 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 EPB41L5Q9HCM4 733 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PCDHA13Q9Y5I0 950 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 CROCC2H7BZ55 1655 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 NAA25Q14CX7 972 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PSMD6Q15008 389 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 GDAQ9Y2T3 454 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 MFAP3LO75121 409 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 INHBAP08476 426 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 ARHGAP4P98171 946 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 SF3A3Q12874 501 aaKnown RBP eCLIP17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 NUF2Q9BZD4 464 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 SETBP1Q9Y6X0 1596 aa17.2■□□□□ 0.34
SH3BP4-203ENST00000409212 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
SH3BP4-203ENST00000409212 SNAP25P60880 206 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms