RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 FAM133AQ8N9E0 248 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 GPRC5AQ8NFJ5 357 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 ZNF408Q9H9D4 720 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 IMPACTQ9P2X3 320 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 SEL1LQ9UBV2 794 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 DBR1Q9UK59 544 aaKnown RBP11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 NFE2L3Q9Y4A8 694 aa11.5□□□□□ -0.57
SNORD88C-201ENST00000408061 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CCL15-CCL14A0A0B4J2E2 113 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 FRMD3A2A2Y4 597 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 MANSC4A6NHS7 340 aaPredicted RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 LRRC10BA6NIK2 292 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CNMDO75829 334 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 PTMAP06454 111 aaKnown RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 FCER1AP12319 257 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ZNF18P17022 549 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CYP11B2P19099 503 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ERCC3P19447 782 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CDK11BP21127 795 aaKnown RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CCNE1P24864 410 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 PRCPP42785 496 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ALDH5A1P51649 535 aaPredicted RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ERVK-24P63145 666 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ECM1Q16610 540 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 CCL15Q16663 113 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 FILIP1LQ4L180 1135 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 C4orf19Q8IY42 314 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 IL31RAQ8NI17 732 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 MORC4Q8TE76 937 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 LRRC15Q8TF66 581 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 PARK7Q99497 189 aaKnown RBP11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 UNC45AQ9H3U1 944 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ANKEF1Q9NU02 776 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 PANK4Q9NVE7 773 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 FANCLQ9NW38 375 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 ODF2LQ9ULJ1 636 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 COL4A3BPQ9Y5P4 624 aa11.49□□□□□ -0.57
SNORD88C-201ENST00000408061 DNAJC25-GNG10A0A024R161 153 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 ASB14A6NK59 587 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 E9PMD0 336 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 PDHXO00330 501 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 EML1O00423 815 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 SERPINC1P01008 464 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 KRT18P05783 430 aaKnown RBP11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 PSMC5P62195 406 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 FANCCQ00597 558 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 LRRC63Q05C16 580 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 NEDD9Q14511 834 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 CDKAL1Q5VV42 579 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 CENPPQ6IPU0 288 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 STXBP4Q6ZWJ1 553 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 OTUD6AQ7L8S5 288 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 KCNK18Q7Z418 384 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 GPBP1Q86WP2 473 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 TPH2Q8IWU9 490 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 SMCR8Q8TEV9 937 aaPredicted RBP11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 NELFBQ8WX92 580 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 DYDC2Q96IM9 177 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 HHIPL1Q96JK4 782 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 MMP19Q99542 508 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 PAGR1Q9BTK6 254 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 THAP9Q9H5L6 903 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 DIS3Q9Y2L1 958 aaKnown RBP11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 KIAA1217Q5T5P2 1943 aa11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 ZNFX1Q9P2E3 1918 aaKnown RBP11.48□□□□□ -0.57
SNORD88C-201ENST00000408061 A0A087WWV3 80 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 AP5Z1O43299 807 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 SSBP05455 408 aaKnown RBP eCLIP11.47□□□□□ -0.578e-11■■■■□ 20.6
SNORD88C-201ENST00000408061 PSAPP07602 524 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 IDEP14735 1019 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 CD44P16070 742 aaKnown RBP11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 SCP2P22307 547 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 CASP1P29466 404 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 ABCD1P33897 745 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 UBASH3AP57075 661 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 GSDMDP57764 484 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 FMR1Q06787 632 aaKnown RBP eCLIP11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 ITGB3BPQ13352 177 aaPredicted RBP11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 IRF5Q13568 498 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 FAM26FQ5R3K3 315 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 CST9Q5W186 159 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 SLC17A8Q8NDX2 589 aa11.47□□□□□ -0.57
SNORD88C-201ENST00000408061 BRI3BPQ8WY22 251 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms