RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 CFAP45Q9UL16 551 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 UBIAD1Q9Y5Z9 338 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 ZNF236Q9UL36 1845 aa9.45□□□□□ -0.9
GPC3-203ENST00000406757 IGLV3-22A0A075B6J6 115 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 CYP3A7-CYP3A51PA0A087WV96 503 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 DDX39AO00148 427 aaKnown RBP9.44□□□□□ -0.9
GPC3-203ENST00000406757 MSH4O15457 936 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 NEMFO60524 1076 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 ATP9AO75110 1047 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 RGS20O76081 388 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 CYP3A7P24462 503 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 CIITAP33076 1130 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 LRRC41Q15345 812 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 STXBP2Q15833 593 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 CALCRLQ16602 461 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 CEP55Q53EZ4 464 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 ZNF697Q5TEC3 545 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 FAM109BQ6ICB4 259 aaPredicted RBP9.44□□□□□ -0.9
GPC3-203ENST00000406757 PPP4R3AQ6IN85 833 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 ARMCX2Q7L311 632 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.44□□□□□ -0.9
GPC3-203ENST00000406757 FBXO16Q8IX29 292 aaPredicted RBP9.44□□□□□ -0.9
GPC3-203ENST00000406757 ABRAQ8N0Z2 381 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 DNERQ8NFT8 737 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 HAS1Q92839 578 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 BADQ92934 168 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 LENG9Q96B70 501 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 GBP4Q96PP9 640 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 COL25A1Q9BXS0 654 aaPredicted RBP9.44□□□□□ -0.9
GPC3-203ENST00000406757 JADE2Q9NQC1 790 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 PDGFCQ9NRA1 345 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 SLC5A4Q9NY91 659 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 ADD3Q9UEY8 706 aaKnown RBP9.44□□□□□ -0.9
GPC3-203ENST00000406757 PCDHA7Q9UN72 937 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 TELO2Q9Y4R8 837 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 STK24Q9Y6E0 443 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 PRUNE2Q8WUY3 3088 aa9.44□□□□□ -0.9
GPC3-203ENST00000406757 PLXNA1Q9UIW2 1896 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 VWA3AA6NCI4 1184 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 TRIM43BA6NCK2 446 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 ASB14A6NK59 587 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 MEIS1O00470 390 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 YEATS4O95619 227 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 SNAI1O95863 264 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 OR52Z1P0C646 297 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 EDNRBP24530 442 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 CDC25AP30304 524 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 MCM4P33991 863 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 TECP42680 631 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 ME1P48163 572 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 ATP2C1P98194 919 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 Q4G0T1 1027 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 ATL3Q6DD88 541 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 SH3RF1Q7Z6J0 888 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 TRIM43Q96BQ3 446 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 MBOAT7Q96N66 472 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 MTMR9Q96QG7 549 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 IWS1Q96ST2 819 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 PANK2Q9BZ23 570 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 SCAND2PQ9GZW5 306 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 CSRNP2Q9H175 543 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 AGO4Q9HCK5 861 aaKnown RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 PDLIM7Q9NR12 457 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 LMBRD1Q9NUN5 540 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 FBXO2Q9UK22 296 aaPredicted RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 CEP131Q9UPN4 1083 aa9.43□□□□□ -0.9
GPC3-203ENST00000406757 SPTBN5Q9NRC6 3674 aaKnown RBP9.43□□□□□ -0.9
GPC3-203ENST00000406757 PP2D1A8MPX8 630 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 CHMP2AO43633 222 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 EIF3JO75822 258 aaKnown RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 ARIH2O95376 493 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 PGK1P00558 417 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 SP2Q02086 613 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 SP4Q02446 784 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 ITGB3BPQ13352 177 aaPredicted RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 MTMR1Q13613 665 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 SNX17Q15036 470 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 NFKBIBQ15653 356 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 LY6KQ17RY6 165 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 AXDND1Q5T1B0 1012 aaPredicted RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 DTHD1Q6ZMT9 781 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 CLEC17AQ6ZS10 378 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 USP49Q70CQ1 688 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 NLRX1Q86UT6 975 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 TEX2Q8IWB9 1127 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 ETNPPLQ8TBG4 499 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 COPS5Q92905 334 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 CDX2Q99626 313 aaPredicted RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 NAP1L4Q99733 375 aaKnown RBP9.42□□□□□ -0.9
GPC3-203ENST00000406757 TINF2Q9BSI4 451 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 ZNF577Q9BSK1 485 aa9.42□□□□□ -0.9
GPC3-203ENST00000406757 MAF1Q9H063 256 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms