RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 ZHX2Q9Y6X8 837 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 TTC26A0AVF1 554 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 IPO5O00410 1097 aaKnown RBP27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 SLITRK3O94933 977 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 EPS15P42566 896 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 FKBP3Q00688 224 aaKnown RBP27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 SYCP1Q15431 976 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 TSR1Q2NL82 804 aaKnown RBP27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 VWA3BQ502W6 1294 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 LRRC55Q6ZSA7 311 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 PCMTD1Q96MG8 357 aaPredicted RBP27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 REEP2Q9BRK0 252 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 FGFBP2Q9BYJ0 223 aa27.35■■□□□ 1.97
DNMT3A-206ENST00000406659 TRAF5O00463 557 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 MUTP22033 750 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 MAN2A1Q16706 1144 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 ZCWPW2Q504Y3 356 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 NIPA1Q7RTP0 329 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 NELFCDQ8IXH7 590 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 RETREG2Q8NC44 543 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 OR8K1Q8NGG5 319 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 SYTL5Q8TDW5 730 aaPredicted RBP27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 RIT2Q99578 217 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 UNC45AQ9H3U1 944 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 FZD1Q9UP38 647 aa27.34■■□□□ 1.97
DNMT3A-206ENST00000406659 VWA5AO00534 786 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 BCRP11274 1271 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 EPHA7Q15375 998 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 SUPT20HL1Q3ZLR7 823 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 TRERF1Q96PN7 1200 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 ERGIC2Q96RQ1 377 aa27.33■■□□□ 1.97
DNMT3A-206ENST00000406659 C19orf81C9J6K1 198 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 TBCAO75347 108 aaKnown RBP27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 HIRAP54198 1017 aaPredicted RBP27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 TRIM65Q6PJ69 517 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 PIGOQ8TEQ8 1089 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 SCFD1Q8WVM8 642 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 ATG4CQ96DT6 458 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 NDST4Q9H3R1 872 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 SPON1Q9HCB6 807 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 ADGRG1Q9Y653 693 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 ITGB5P18084 799 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 TRIM21P19474 475 aaKnown RBP27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 HMGCS2P54868 508 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 PCNX4Q63HM2 1172 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 SFR1Q86XK3 245 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 KLRG1Q96E93 195 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 CEP63Q96MT8 703 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 RUSC1Q9BVN2 902 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 DNAI1Q9UI46 699 aa27.32■■□□□ 1.96
DNMT3A-206ENST00000406659 DICER1Q9UPY3 1922 aaKnown RBP27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 IL31RAQ8NI17 732 aa27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 C12orf42Q96LP6 360 aa27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 NACC1Q96RE7 527 aa27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 COL4A3BPQ9Y5P4 624 aa27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 PHLPP2Q6ZVD8 1323 aa27.31■■□□□ 1.96
DNMT3A-206ENST00000406659 RPS6P62753 249 aaKnown RBP27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 ERVK-24P63145 666 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 TKFCQ3LXA3 575 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 CCDC40Q4G0X9 1142 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 RINT1Q6NUQ1 792 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 TAAR1Q96RJ0 339 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 DNAJC7Q99615 494 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 KCTD10Q9H3F6 313 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 KCNH7Q9NS40 1196 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 UBIAD1Q9Y5Z9 338 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 CTIFO43310 598 aaKnown RBP27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 GNA14O95837 355 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 GAP43P17677 238 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 PPP4R3CPQ6ZMV5 832 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 TSC1Q92574 1164 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 IQCDQ96DY2 449 aa27.3■■□□□ 1.96
DNMT3A-206ENST00000406659 NKRFO15226 690 aaKnown RBP eCLIP27.29■■□□□ 1.961e-7■■■■□ 23.4
DNMT3A-206ENST00000406659 KLK7P49862 253 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 B3GNT9Q6UX72 402 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 RNF207Q6ZRF8 634 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 JADE2Q9NQC1 790 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 TMOD4Q9NZQ9 345 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 PKD2L1Q9P0L9 805 aa27.29■■□□□ 1.96
DNMT3A-206ENST00000406659 FRMPD4Q14CM0 1322 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 DDX39AO00148 427 aaKnown RBP27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 EIF2AK2P19525 551 aaKnown RBP27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 NOL9Q5SY16 702 aaKnown RBP27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 NSMFQ6X4W1 530 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 MIER3Q7Z3K6 550 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 ZNF397Q8NF99 534 aaPredicted RBP27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 NEK9Q8TD19 979 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 TTYH3Q9C0H2 523 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 RNF146Q9NTX7 359 aa27.28■■□□□ 1.96
DNMT3A-206ENST00000406659 RASSF10A6NK89 507 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 RSPH10B2B2RC85 870 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 RSPH10BP0C881 870 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 DSG3P32926 999 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 FIGNQ5HY92 759 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 WNK4Q96J92 1243 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 MRPL44Q9H9J2 332 aaKnown RBP27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 AGO4Q9HCK5 861 aaKnown RBP27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 ZNHIT6Q9NWK9 470 aaKnown RBP27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 A0A1W2PQJ5 194 aa27.27■■□□□ 1.96
DNMT3A-206ENST00000406659 FAM13AO94988 1023 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms