RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 GNASQ5JWF2 1037 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 NLRX1Q86UT6 975 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 VSIG10LQ86VR7 867 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 DIS3L2Q8IYB7 885 aaKnown RBP12□□□□□ -0.49
RPAIN-204ENST00000405578 MORC4Q8TE76 937 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 HLA-CQ95604 372 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 WNT8AQ9H1J5 351 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 CD320Q9NPF0 282 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 FOXD4L1Q9NU39 408 aa12□□□□□ -0.49
RPAIN-204ENST00000405578 SREBF1P36956 1147 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 GJA9P57773 515 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 BEX3Q00994 111 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 GUCY1B3Q02153 619 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 NONOQ15233 471 aaKnown RBP eCLIP11.99□□□□□ -0.49
RPAIN-204ENST00000405578 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 MCTP1Q6DN14 999 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 KCNV1Q6PIU1 500 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 ARNTL2Q8WYA1 636 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 CDHR1Q96JP9 859 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 FGD4Q96M96 766 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
RPAIN-204ENST00000405578 NOC4LQ9BVI4 516 aaKnown RBP11.99□□□□□ -0.49
RPAIN-204ENST00000405578 FOXP1Q9H334 677 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-204ENST00000405578 GJB4Q9NTQ9 266 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 TMEM260Q9NX78 707 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 FRMPD4Q14CM0 1322 aa11.99□□□□□ -0.49
RPAIN-204ENST00000405578 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 ASTN1O14525 1302 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 PRR33A8MZF0 331 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 BTBD18B2RXH4 712 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 CTAGE5O15320 804 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 USP11P51784 963 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 ARHGAP4P98171 946 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 IQSEC1Q6DN90 963 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 CXCL17Q6UXB2 119 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 EEPD1Q7L9B9 569 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 RPUSD2Q8IZ73 545 aaKnown RBP11.98□□□□□ -0.49
RPAIN-204ENST00000405578 RASGRP4Q8TDF6 673 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 SCFD2Q8WU76 684 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 SCLYQ96I15 445 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 PGBD1Q96JS3 809 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 UIMC1Q96RL1 719 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 MRVI1Q9Y6F6 885 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 ZNF318Q5VUA4 2279 aa11.98□□□□□ -0.49
RPAIN-204ENST00000405578 VPS37CA5D8V6 355 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-204ENST00000405578 MAFGO15525 162 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 ARHGEF15O94989 841 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 CYP3A4P08684 503 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 TGFB3P10600 412 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 NHLH1Q02575 133 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 NR5A1Q13285 461 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 NPY5RQ15761 445 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 CEP55Q53EZ4 464 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 PIK3AP1Q6ZUJ8 805 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 FBXO16Q8IX29 292 aaPredicted RBP11.97□□□□□ -0.49
RPAIN-204ENST00000405578 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 OXER1Q8TDS5 423 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 TBCKQ8TEA7 893 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 VWCEQ96DN2 955 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 TRPV6Q9H1D0 765 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 RTEL1Q9NZ71 1219 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 NOL7Q9UMY1 257 aaKnown RBP11.97□□□□□ -0.49
RPAIN-204ENST00000405578 SIP14410 1827 aa11.97□□□□□ -0.49
RPAIN-204ENST00000405578 BAZ2BQ9UIF8 2168 aaKnown RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 TRIP12Q14669 1992 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 M0R2N6 131 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 NKRFO15226 690 aaKnown RBP eCLIP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 FIBPO43427 364 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 B4GALT4O60513 344 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 SYT1P21579 422 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 TAP1Q03518 808 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 GRB10Q13322 594 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 MTMR1Q13613 665 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 ITGA7Q13683 1181 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 INF2Q27J81 1249 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 NEK8Q86SG6 692 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 NOSTRINQ8IVI9 506 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 IL31RAQ8NI17 732 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 GPRASP2Q96D09 838 aa11.96□□□□□ -0.49
RPAIN-204ENST00000405578 INPP4AQ96PE3 977 aaPredicted RBP11.96□□□□□ -0.49
RPAIN-204ENST00000405578 GRIN2DO15399 1336 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 STX6O43752 255 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 TXNP10599 105 aaKnown RBP11.95□□□□□ -0.5
RPAIN-204ENST00000405578 U2AF2P26368 475 aaKnown RBP eCLIP11.95□□□□□ -0.56e-8■□□□□ 8.3
RPAIN-204ENST00000405578 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 MRPS9P82933 396 aaKnown RBP11.95□□□□□ -0.5
RPAIN-204ENST00000405578 NEDD9Q14511 834 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 BRDTQ58F21 947 aaPredicted RBP11.95□□□□□ -0.5
RPAIN-204ENST00000405578 MOXD1Q6UVY6 613 aa11.95□□□□□ -0.5
RPAIN-204ENST00000405578 NIPA1Q7RTP0 329 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms