RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 LAD1O00515 517 aa33.11■■■□□ 2.89
USP42-202ENST00000404008 ACLYP53396 1101 aa33.11■■■□□ 2.89
USP42-202ENST00000404008 SEPT1Q8WYJ6 367 aa33.11■■■□□ 2.89
USP42-202ENST00000404008 FTOQ9C0B1 505 aaKnown RBP eCLIP33.11■■■□□ 2.89
USP42-202ENST00000404008 POLR3EQ9NVU0 708 aa33.11■■■□□ 2.89
USP42-202ENST00000404008 KPNA6O60684 536 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 ATG7O95352 703 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 MYL3P08590 195 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 TCF7P36402 384 aaPredicted RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 TXKP42681 527 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 ATP2C1P98194 919 aaPredicted RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 PURAQ00577 322 aaKnown RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 PPP2R5CQ13362 524 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 SF3A1Q15459 793 aaKnown RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 SMAP1Q8IYB5 467 aaPredicted RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 TTC12Q9H892 705 aaPredicted RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 CIZ1Q9ULV3 898 aaPredicted RBP33.1■■■□□ 2.89
USP42-202ENST00000404008 PCDHA12Q9UN75 941 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 CLIC4Q9Y696 253 aa33.1■■■□□ 2.89
USP42-202ENST00000404008 SPIRE1Q08AE8 756 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 DIS3LQ8TF46 1054 aaKnown RBP33.09■■■□□ 2.89
USP42-202ENST00000404008 USP28Q96RU2 1077 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 MKI67P46013 3256 aaKnown RBP33.09■■■□□ 2.89
USP42-202ENST00000404008 CHMP2AO43633 222 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 BMP15O95972 392 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 CXCL17Q6UXB2 119 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 ABHD15Q6UXT9 468 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 ZNF396Q96N95 335 aaPredicted RBP33.09■■■□□ 2.89
USP42-202ENST00000404008 CEP131Q9UPN4 1083 aa33.09■■■□□ 2.89
USP42-202ENST00000404008 WDR64B1ANS9 1081 aa33.08■■■□□ 2.89
USP42-202ENST00000404008 ZNF286BP0CG31 522 aa33.08■■■□□ 2.89
USP42-202ENST00000404008 COL6A1P12109 1028 aa33.08■■■□□ 2.89
USP42-202ENST00000404008 SFNP31947 248 aa33.08■■■□□ 2.89
USP42-202ENST00000404008 PRPHP41219 470 aa33.08■■■□□ 2.89
USP42-202ENST00000404008 FOXD4L6Q3SYB3 417 aaPredicted RBP33.08■■■□□ 2.89
USP42-202ENST00000404008 FOXD4L3Q6VB84 417 aaPredicted RBP33.08■■■□□ 2.89
USP42-202ENST00000404008 SCN10AQ9Y5Y9 1956 aa33.07■■■□□ 2.89
USP42-202ENST00000404008 A0A1W2PQ45 241 aaPredicted RBP33.07■■■□□ 2.88
USP42-202ENST00000404008 A0A1W2PQY0 241 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 LGALS2P05162 132 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 SUPT20HL2P0C7V6 817 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 JAK3P52333 1124 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 UBE2Q1Q7Z7E8 422 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 C16orf70Q9BSU1 422 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 MTG1Q9BT17 334 aaPredicted RBP33.07■■■□□ 2.88
USP42-202ENST00000404008 DISC1Q9NRI5 854 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 PCDHA10Q9Y5I2 948 aa33.07■■■□□ 2.88
USP42-202ENST00000404008 EMSYQ7Z589 1322 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 IGKV6D-21A0A0A0MT36 114 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 LGR5O75473 907 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 CEBPZQ03701 1054 aaKnown RBP33.06■■■□□ 2.88
USP42-202ENST00000404008 PTPAQ15257 358 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 MIS18BP1Q6P0N0 1132 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 RDM1Q8NG50 284 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 FERMT2Q96AC1 680 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 PAWRQ96IZ0 340 aaKnown RBP33.06■■■□□ 2.88
USP42-202ENST00000404008 SAMM50Q9Y512 469 aa33.06■■■□□ 2.88
USP42-202ENST00000404008 MYH9P35579 1960 aaKnown RBP33.06■■■□□ 2.88
USP42-202ENST00000404008 CABYRO75952 493 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 F2P00734 622 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 UTP14CQ5TAP6 766 aaKnown RBP33.05■■■□□ 2.88
USP42-202ENST00000404008 MIER3Q7Z3K6 550 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 KAT2BQ92831 832 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 PCYT2Q99447 389 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 ATP6V1DQ9Y5K8 247 aa33.05■■■□□ 2.88
USP42-202ENST00000404008 EML1O00423 815 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 PSAPP07602 524 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 TECP42680 631 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 NASPP49321 788 aaPredicted RBP33.04■■■□□ 2.88
USP42-202ENST00000404008 FXR2P51116 673 aaKnown RBP eCLIP33.04■■■□□ 2.88
USP42-202ENST00000404008 IL17AQ16552 155 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 ARL6IP4Q66PJ3 421 aaKnown RBP33.04■■■□□ 2.88
USP42-202ENST00000404008 ATL3Q6DD88 541 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 TRIM50Q86XT4 487 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 GLT1D1Q96MS3 346 aa33.04■■■□□ 2.88
USP42-202ENST00000404008 TFIP11Q9UBB9 837 aaKnown RBP33.04■■■□□ 2.88
USP42-202ENST00000404008 DNM1Q05193 864 aaKnown RBP33.03■■■□□ 2.88
USP42-202ENST00000404008 TMEM266Q2M3C6 531 aa33.03■■■□□ 2.88
USP42-202ENST00000404008 NCAPH2Q6IBW4 605 aa33.03■■■□□ 2.88
USP42-202ENST00000404008 DTHD1Q6ZMT9 781 aa33.03■■■□□ 2.88
USP42-202ENST00000404008 NECAB2Q7Z6G3 386 aa33.03■■■□□ 2.88
USP42-202ENST00000404008 CCDC60Q8IWA6 550 aaPredicted RBP33.03■■■□□ 2.88
USP42-202ENST00000404008 SENP6Q9GZR1 1112 aaPredicted RBP33.03■■■□□ 2.88
USP42-202ENST00000404008 C11orf49Q9H6J7 331 aa33.03■■■□□ 2.88
USP42-202ENST00000404008 TCHHQ07283 1943 aa33.02■■■□□ 2.88
USP42-202ENST00000404008 SMARCAD1Q9H4L7 1026 aa33.02■■■□□ 2.88
USP42-202ENST00000404008 POTEMA6NI47 508 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 H3BRB1 525 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 SLC39A14Q15043 492 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 SWSAP1Q6NVH7 229 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 AFAP1L1Q8TED9 768 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 GLG1Q92896 1179 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 KATNAL1Q9BW62 490 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 TUT1Q9H6E5 874 aaKnown RBP33.01■■■□□ 2.88
USP42-202ENST00000404008 AZI2Q9H6S1 392 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 STARD7Q9NQZ5 370 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 CHMP5Q9NZZ3 219 aa33.01■■■□□ 2.88
USP42-202ENST00000404008 MORC2Q9Y6X9 1032 aaPredicted RBP33.01■■■□□ 2.88
USP42-202ENST00000404008 BACH1O14867 736 aa33■■■□□ 2.87
USP42-202ENST00000404008 PSMC6P62333 389 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms