RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KIF18BQ86Y91 864 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 SMC1BQ8NDV3 1235 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 TSPAN17Q96FV3 270 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 BOCQ9BWV1 1114 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 NSUN3Q9H649 340 aaKnown RBP6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZNF552Q9H707 407 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 ATP8A1Q9Y2Q0 1164 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 FAM90A27PA6NNH2 459 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 DVL2O14641 736 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 MAFKO60675 156 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZBTB7AO95365 584 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 EPHA5P54756 1037 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 IL2P60568 153 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 MLANAQ16655 118 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 FIGNQ5HY92 759 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 RPUSD2Q8IZ73 545 aaKnown RBP6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 ATL2Q8NHH9 583 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 PHOSPHO1Q8TCT1 267 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 ALG3Q92685 438 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 USP7Q93009 1102 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 BRINP2Q9C0B6 783 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 SPTLC3Q9NUV7 552 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 OXSMQ9NWU1 459 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 ATP23Q9Y6H3 246 aa6.91□□□□□ -1.3
HMGB3P19-201ENST00000403971 MYOCOSA0A1B0GUC4 107 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 ACOT7O00154 380 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 BPIP17213 487 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 PMLP29590 882 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 NCKAP1LP55160 1127 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 IGBP1P78318 339 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 SART3Q15020 963 aaKnown RBP6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 NLGN4XQ8N0W4 816 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 PRPF38AQ8NAV1 312 aaKnown RBP6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 RIC8BQ9NVN3 520 aa6.9□□□□□ -1.3
HMGB3P19-201ENST00000403971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 ABLIM1O14639 778 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 CLASP2O75122 1294 aaKnown RBP6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 FKBP9O95302 570 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 SLC9A1P19634 815 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 CDK11BP21127 795 aaKnown RBP6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 STAT5AP42229 794 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 ANAPC15P60006 121 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 TMEM62Q0P6H9 643 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 STAT4Q14765 748 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 FKBP9P1Q75LS8 142 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 FAM26EQ8N5C1 309 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 TTC1Q99614 292 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 MCOLN1Q9GZU1 580 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 EPB41L4BQ9H329 900 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 IFT22Q9H7X7 185 aa6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 DCP1AQ9NPI6 582 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P19-201ENST00000403971 NESP48681 1621 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 LRRC10BA6NIK2 292 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 H7C1D1 291 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 PPM1GO15355 546 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 BUB1BO60566 1050 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 ASGR2P07307 311 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 FBLN1P23142 703 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 MC3RP41968 323 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 KPNA1P52294 538 aaPredicted RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 KIF11P52732 1056 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 FAM50AQ14320 339 aaKnown RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 PAN2Q504Q3 1202 aaKnown RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 MIB1Q86YT6 1006 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 TRIM48Q8IWZ4 208 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 KIAA1958Q8N8K9 716 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 DLG3Q92796 817 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 PUS7Q96PZ0 661 aaKnown RBP6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 SYT3Q9BQG1 590 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 SGPP1Q9BX95 441 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 CNTD2Q9H8S5 307 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 RBPJLQ9UBG7 517 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 MCM8Q9UJA3 840 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 NUB1Q9Y5A7 615 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 B3GALT1Q9Y5Z6 326 aa6.88□□□□□ -1.31
HMGB3P19-201ENST00000403971 KIF21AQ7Z4S6 1674 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 PDS5BQ9NTI5 1447 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 PRAMEF25A6NGN4 478 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 HRKO00198 91 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 TGM5O43548 720 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 HIP1RO75146 1068 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 LRG1P02750 347 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 LSSP48449 732 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 TMPRSS15P98073 1019 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 ETV3LQ6ZN32 361 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 AMIGO3Q86WK7 504 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 FAM126BQ8IXS8 530 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 ANKRD13AQ8IZ07 590 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 WDR66Q8TBY9 1149 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 ELF4Q99607 663 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 YIPF4Q9BSR8 244 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 EMC7Q9NPA0 242 aa6.87□□□□□ -1.31
HMGB3P19-201ENST00000403971 KCNH7Q9NS40 1196 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 144.8 ms