RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 KRI1Q8N9T8 703 aaKnown RBP37.5■■■■□ 3.59
CSNK1E-204ENST00000403904 CLIC6Q96NY7 704 aa37.5■■■■□ 3.59
CSNK1E-204ENST00000403904 EML1O00423 815 aa37.49■■■■□ 3.59
CSNK1E-204ENST00000403904 NOP56O00567 594 aaKnown RBP37.49■■■■□ 3.59
CSNK1E-204ENST00000403904 ME1P48163 572 aa37.49■■■■□ 3.59
CSNK1E-204ENST00000403904 GPR20Q99678 358 aa37.49■■■■□ 3.59
CSNK1E-204ENST00000403904 ELP1O95163 1332 aa37.48■■■■□ 3.59
CSNK1E-204ENST00000403904 IGSF22Q8N9C0 903 aa37.48■■■■□ 3.59
CSNK1E-204ENST00000403904 PPTC7Q8NI37 304 aa37.48■■■■□ 3.59
CSNK1E-204ENST00000403904 SAMM50Q9Y512 469 aa37.48■■■■□ 3.59
CSNK1E-204ENST00000403904 FRMPD3Q5JV73 1810 aa37.48■■■■□ 3.59
CSNK1E-204ENST00000403904 C6orf222P0C671 652 aaPredicted RBP37.47■■■■□ 3.59
CSNK1E-204ENST00000403904 GJA9P57773 515 aa37.47■■■■□ 3.59
CSNK1E-204ENST00000403904 DEFB118Q96PH6 123 aa37.47■■■■□ 3.59
CSNK1E-204ENST00000403904 DISC1Q9NRI5 854 aa37.47■■■■□ 3.59
CSNK1E-204ENST00000403904 PCDHA7Q9UN72 937 aa37.47■■■■□ 3.59
CSNK1E-204ENST00000403904 GSTTP1A0A1W2PQM5 241 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 PDIA5Q14554 519 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 MIER3Q7Z3K6 550 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 RAB34Q9BZG1 259 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 UPF3AQ9H1J1 476 aaKnown RBP37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 LRWD1Q9UFC0 647 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 MYADML2A6NDP7 307 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 WDR64B1ANS9 1081 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 CTAGE5O15320 804 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 BEX3Q00994 111 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 SMAP1Q8IYB5 467 aaPredicted RBP37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 SEPT1Q8WYJ6 367 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 CSRNP2Q9H175 543 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 SPC25Q9HBM1 224 aa37.46■■■■□ 3.59
CSNK1E-204ENST00000403904 A6NJR5 290 aa37.45■■■■□ 3.59
CSNK1E-204ENST00000403904 PP2D1A8MPX8 630 aa37.45■■■■□ 3.59
CSNK1E-204ENST00000403904 ADAMTS4O75173 837 aa37.45■■■■□ 3.59
CSNK1E-204ENST00000403904 ABHD15Q6UXT9 468 aa37.45■■■■□ 3.59
CSNK1E-204ENST00000403904 CLEC17AQ6ZS10 378 aa37.45■■■■□ 3.59
CSNK1E-204ENST00000403904 MYCNP04198 464 aaPredicted RBP37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 MMP3P08254 477 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 CDC25AP30304 524 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 SFNP31947 248 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 TCF7P36402 384 aaPredicted RBP37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 JAK3P52333 1124 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 FSCN1Q16658 493 aaKnown RBP37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 SPECC1Q5M775 1068 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 PCDHA10Q9Y5I2 948 aa37.44■■■■□ 3.58
CSNK1E-204ENST00000403904 ATG7O95352 703 aa37.43■■■■□ 3.58
CSNK1E-204ENST00000403904 LONP1P36776 959 aaKnown RBP37.43■■■■□ 3.58
CSNK1E-204ENST00000403904 CPT1AP50416 773 aa37.43■■■■□ 3.58
CSNK1E-204ENST00000403904 AXDND1Q5T1B0 1012 aaPredicted RBP37.43■■■■□ 3.58
CSNK1E-204ENST00000403904 WDR81Q562E7 1941 aa37.43■■■■□ 3.58
CSNK1E-204ENST00000403904 GNASQ5JWF2 1037 aa37.42■■■■□ 3.58
CSNK1E-204ENST00000403904 CUTAO60888 179 aa37.42■■■■□ 3.58
CSNK1E-204ENST00000403904 SUPT20HL2P0C7V6 817 aa37.42■■■■□ 3.58
CSNK1E-204ENST00000403904 MIS18BP1Q6P0N0 1132 aa37.42■■■■□ 3.58
CSNK1E-204ENST00000403904 NKX3-2P78367 333 aa37.41■■■■□ 3.58
CSNK1E-204ENST00000403904 EPHA7Q15375 998 aa37.41■■■■□ 3.58
CSNK1E-204ENST00000403904 BRDTQ58F21 947 aaPredicted RBP37.41■■■■□ 3.58
CSNK1E-204ENST00000403904 COL13A1Q5TAT6 717 aaPredicted RBP37.41■■■■□ 3.58
CSNK1E-204ENST00000403904 RDM1Q8NG50 284 aa37.41■■■■□ 3.58
CSNK1E-204ENST00000403904 PPFIA4O75335 1185 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 PSAPP07602 524 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 DGKDQ16760 1214 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 TPRNQ4KMQ1 711 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 UTP14CQ5TAP6 766 aaKnown RBP37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 AK8Q96MA6 479 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 GBP4Q96PP9 640 aa37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 EIF2AK1Q9BQI3 630 aaKnown RBP37.4■■■■□ 3.58
CSNK1E-204ENST00000403904 SWSAP1Q6NVH7 229 aa37.39■■■■□ 3.58
CSNK1E-204ENST00000403904 USP49Q70CQ1 688 aa37.39■■■■□ 3.58
CSNK1E-204ENST00000403904 CCDC60Q8IWA6 550 aaPredicted RBP37.39■■■■□ 3.58
CSNK1E-204ENST00000403904 KLHDC9Q8NEP7 349 aa37.39■■■■□ 3.58
CSNK1E-204ENST00000403904 RGL1Q9NZL6 768 aa37.39■■■■□ 3.58
CSNK1E-204ENST00000403904 BACH1O14867 736 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 GJB1P08034 283 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 HOXD8P13378 290 aaPredicted RBP37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 LRRC41Q15345 812 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 RNF180Q86T96 592 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 EPSTI1Q96J88 318 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 PCYT2Q99447 389 aa37.38■■■■□ 3.58
CSNK1E-204ENST00000403904 CYP4A11Q02928 519 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 CSPP1Q1MSJ5 1256 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 TRIM50Q86XT4 487 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 ZNF579Q8NAF0 562 aaKnown RBP37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 BANK1Q8NDB2 785 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 ERMNQ8TAM6 284 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 DYDC2Q96IM9 177 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 MMTAG2Q9BU76 263 aaKnown RBP37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 GABBR1Q9UBS5 961 aa37.38■■■■□ 3.57
CSNK1E-204ENST00000403904 MYH9P35579 1960 aaKnown RBP37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 IGKV6D-21A0A0A0MT36 114 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 ZNF286BP0CG31 522 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 ADALQ6DHV7 355 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 SHC4Q6S5L8 630 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 SNX29Q8TEQ0 813 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 U2AF1L4Q8WU68 220 aaKnown RBP37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 SYMPKQ92797 1274 aaKnown RBP37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 HSD17B14Q9BPX1 270 aa37.37■■■■□ 3.57
CSNK1E-204ENST00000403904 DNAH12Q6ZR08 3092 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 SGPL1O95470 568 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 LGALS2P05162 132 aa37.36■■■■□ 3.57
CSNK1E-204ENST00000403904 MYL3P08590 195 aa37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms