RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 A6NNZ2 444 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 EIF3HO15372 352 aaKnown RBP eCLIP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 MATR3P43243 847 aaKnown RBP eCLIP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 EIF6P56537 245 aaKnown RBP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 PDIA5Q14554 519 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 TUBB8Q3ZCM7 444 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 DYMQ7RTS9 669 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 PACS2Q86VP3 889 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 TSEN2Q8NCE0 465 aaKnown RBP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 SYN2Q92777 582 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 GMLQ99445 158 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 SMARCAL1Q9NZC9 954 aa21.86■■□□□ 1.09
CCDC47-202ENST00000403162 BIN2Q9UBW5 565 aaPredicted RBP21.86■■□□□ 1.09
CCDC47-202ENST00000403162 NCK2O43639 380 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 HSF2BPO75031 334 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 CDK8P49336 464 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 SKOR1P84550 965 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 HDLBPQ00341 1268 aaKnown RBP21.85■■□□□ 1.09
CCDC47-202ENST00000403162 GFPT1Q06210 699 aaPredicted RBP21.85■■□□□ 1.09
CCDC47-202ENST00000403162 CFAP221Q4G0U5 840 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 USP17L2Q6R6M4 530 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 CACNA2D4Q7Z3S7 1137 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 TEX11Q8IYF3 940 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 PSMB7Q99436 277 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 MRIQ9BWK5 157 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 RAB34Q9BZG1 259 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 RBM12Q9NTZ6 932 aaKnown RBP21.85■■□□□ 1.09
CCDC47-202ENST00000403162 EHD2Q9NZN4 543 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 A0A087WUV0 522 aaPredicted RBP21.85■■□□□ 1.09
CCDC47-202ENST00000403162 FZD9O00144 591 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 SLC1A4P43007 532 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 RHBDL3P58872 404 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 GPR162Q16538 588 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 ZDHHC15Q96MV8 337 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 PIGSQ96S52 555 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 RUFY1Q96T51 708 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 CEP72Q9P209 647 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 SAP30BPQ9UHR5 308 aaKnown RBP21.85■■□□□ 1.09
CCDC47-202ENST00000403162 SERPINA10Q9UK55 444 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 ADAMTSL1Q8N6G6 1762 aa21.85■■□□□ 1.09
CCDC47-202ENST00000403162 KCNMA1Q12791 1236 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 TMEM119Q4V9L6 283 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 MAPKAPK5Q8IW41 473 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 AGBL3Q8NEM8 1001 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 TMEM260Q9NX78 707 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 PCDHAC2Q9Y5I4 1007 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 ANKRD65E5RJM6 399 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 CCT5P48643 541 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 NOVP48745 357 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 ZCWPW2Q504Y3 356 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 TTMPQ5BVD1 217 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 APOBEC3HQ6NTF7 200 aaKnown RBP21.84■■□□□ 1.09
CCDC47-202ENST00000403162 TADA2BQ86TJ2 420 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 DDX12PQ92771 950 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 RIOX1Q9H6W3 641 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 GDF3Q9NR23 364 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 HDAC9Q9UKV0 1011 aa21.84■■□□□ 1.09
CCDC47-202ENST00000403162 EBAG9O00559 213 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 SLC37A4O43826 429 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 SERPING1P05155 500 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 GNGT1P63211 74 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 MRPS25P82663 173 aaKnown RBP21.83■■□□□ 1.09
CCDC47-202ENST00000403162 SLC9C1Q4G0N8 1177 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 IFT20Q8IY31 132 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 OGFOD1Q8N543 542 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 ANKRD13CQ8N6S4 541 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 LUC7LQ9NQ29 371 aaKnown RBP21.83■■□□□ 1.09
CCDC47-202ENST00000403162 USP40Q9NVE5 1235 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 GJA3Q9Y6H8 435 aa21.83■■□□□ 1.09
CCDC47-202ENST00000403162 APBA1Q02410 837 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 SEPT2Q15019 361 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 KRT79Q5XKE5 535 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 COL4A3BPQ9Y5P4 624 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 ATAD5Q96QE3 1844 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 SHTN1A0MZ66 631 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 BUB1O43683 1085 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 EDIL3O43854 480 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 FKBP3Q00688 224 aaKnown RBP21.82■■□□□ 1.08
CCDC47-202ENST00000403162 ATP2B2Q01814 1243 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 TDRD12Q587J7 1177 aaKnown RBP21.82■■□□□ 1.08
CCDC47-202ENST00000403162 MYOCDQ8IZQ8 938 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 BCAS4Q8TDM0 211 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 SNX29Q8TEQ0 813 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 ARL8AQ96BM9 186 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 VAT1LQ9HCJ6 419 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 UTRNP46939 3433 aa21.82■■□□□ 1.08
CCDC47-202ENST00000403162 ZNF541Q9H0D2 1346 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 GRID2IPA4D2P6 1211 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 SFMBT2Q5VUG0 894 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 CDC42EP5Q6NZY7 148 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 TANGO6Q9C0B7 1094 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 RNF181Q9P0P0 153 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 POTEMA6NI47 508 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 TLR2O60603 784 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 NOL4O94818 638 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 TDP2O95551 362 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 PAK2Q13177 524 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 NAB2Q15742 525 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 MREGQ8N565 214 aa21.81■■□□□ 1.08
CCDC47-202ENST00000403162 CEP95Q96GE4 821 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms