RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 C16orf70Q9BSU1 422 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 POLR3CQ9BUI4 534 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 PDGFCQ9NRA1 345 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 SQORQ9Y6N5 450 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 A0A1W2PQ45 241 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 GSTTP1A0A1W2PQM5 241 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 A0A1W2PQY0 241 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 RRN3P2A6NIE6 340 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 KIF28PB7ZC32 967 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 PPP6R2O75170 966 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 OR52Z1P0C646 297 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 NR5A1Q13285 461 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 NOL8Q76FK4 1167 aaKnown RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 HAS1Q92839 578 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 ZNF396Q96N95 335 aaPredicted RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 NIFKQ9BYG3 293 aaKnown RBP8.5□□□□□ -1.05
USP16-204ENST00000399976 PCDHA10Q9Y5I2 948 aa8.5□□□□□ -1.05
USP16-204ENST00000399976 ARVCFO00192 962 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ADAMTS3O15072 1205 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 CD4P01730 458 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ARP10275 920 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 GNAT1P11488 350 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 RFC2P35250 354 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 TOB1P50616 345 aaPredicted RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 ADAM17P78536 824 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ZNF484Q5JVG2 852 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 CLEC17AQ6ZS10 378 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 SEPT14Q6ZU15 432 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 C4orf19Q8IY42 314 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 GLT1D1Q96MS3 346 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 MLXIPQ9HAP2 919 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ERAP1Q9NZ08 941 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 RTEL1Q9NZ71 1219 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 MBLAC1A4D2B0 266 aaPredicted RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 F13A1P00488 732 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 TFRCP02786 760 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 LGALS2P05162 132 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ANP32AP39687 249 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 CDC42EP1Q00587 391 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 KCNA10Q16322 511 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 CALCRLQ16602 461 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 TMEM266Q2M3C6 531 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 EARS2Q5JPH6 523 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 PRAMEF19Q5SWL8 479 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 LRCH2Q5VUJ6 765 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 SLC39A5Q6ZMH5 540 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 CCDC155Q8N6L0 562 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 BBXQ8WY36 941 aaPredicted RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 ATP6V0A1Q93050 837 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 SPATA33Q96N06 139 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 PYM1Q9BRP8 204 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 TIPINQ9BVW5 301 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 NRCAMQ92823 1304 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 KDM3AQ9Y4C1 1321 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 TLR3O15455 904 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 CCNT1O60563 726 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 GAS7O60861 476 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ASGR1P07306 291 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 LONP1P36776 959 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 ACTR2P61160 394 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 GNL2Q13823 731 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 LY6KQ17RY6 165 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 FAM26DQ5JW98 314 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 ERMNQ8TAM6 284 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 RASGRP4Q8TDF6 673 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 KAT2BQ92831 832 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 JPH2Q9BR39 696 aaPredicted RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 ANKEF1Q9NU02 776 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 KCND2Q9NZV8 630 aa8.49□□□□□ -1.05
USP16-204ENST00000399976 DBR1Q9UK59 544 aaKnown RBP8.49□□□□□ -1.05
USP16-204ENST00000399976 PHLPP2Q6ZVD8 1323 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 KIAA0355O15063 1070 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 SLC37A4O43826 429 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 TDP2O95551 362 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 P4HBP07237 508 aaKnown RBP8.48□□□□□ -1.05
USP16-204ENST00000399976 CNGA1P29973 690 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 PSEN2P49810 448 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 LETM2Q2VYF4 491 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 PRR16Q569H4 304 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 CAGE1Q8TC20 777 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 TCHHQ07283 1943 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 NOP56O00567 594 aaKnown RBP8.48□□□□□ -1.05
USP16-204ENST00000399976 DYNC1LI2O43237 492 aaPredicted RBP8.48□□□□□ -1.05
USP16-204ENST00000399976 HBP1O60381 514 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 ATP9AO75110 1047 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 PFKMP08237 780 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 C6orf222P0C671 652 aaPredicted RBP8.48□□□□□ -1.05
USP16-204ENST00000399976 PTK7Q13308 1070 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 PTPAQ15257 358 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 NME8Q8N427 588 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 ATP8B4Q8TF62 1192 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 AFG1LQ8WV93 481 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 GTF2IRD1Q9UHL9 959 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 CFAP45Q9UL16 551 aa8.48□□□□□ -1.05
USP16-204ENST00000399976 FAM237AA0A1B0GTK4 181 aa8.47□□□□□ -1.05
USP16-204ENST00000399976 CCNE2O96020 404 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms