RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 COL4A3BPQ9Y5P4 624 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 DCDC2CA8MYV0 355 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 KLRF2D3W0D1 207 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 SNCBQ16143 134 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 CYB5D1Q6P9G0 228 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 N4BP2L2Q92802 583 aaPredicted RBP15.34■□□□□ 0.05
APOB-202ENST00000399256 SEC16BQ96JE7 1060 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 DONSONQ9NYP3 566 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 TBC1D7Q9P0N9 293 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 FBXL5Q9UKA1 691 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 NOVA2Q9UNW9 492 aaKnown RBP15.34■□□□□ 0.05
APOB-202ENST00000399256 LEMD3Q9Y2U8 911 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 PSEN1P49768 467 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 DRP2Q13474 957 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 ANKRD20A8PQ5CZ79 823 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 KCNK18Q7Z418 384 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 DDX47Q9H0S4 455 aaKnown RBP15.34■□□□□ 0.05
APOB-202ENST00000399256 ACTR5Q9H9F9 607 aaPredicted RBP15.34■□□□□ 0.05
APOB-202ENST00000399256 TMEM59LQ9UK28 342 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 CEP83Q9Y592 693 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 LAMB1P07942 1786 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 BRWD3Q6RI45 1802 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 NF2P35240 595 aa15.33■□□□□ 0.05
APOB-202ENST00000399256 PARP10Q53GL7 1025 aa15.33■□□□□ 0.05
APOB-202ENST00000399256 FUKQ8N0W3 1084 aa15.33■□□□□ 0.05
APOB-202ENST00000399256 C6orf50Q9HD87 102 aa15.33■□□□□ 0.05
APOB-202ENST00000399256 MINPP1Q9UNW1 487 aa15.33■□□□□ 0.05
APOB-202ENST00000399256 SRRM3A6NNA2 597 aaPredicted RBP15.33■□□□□ 0.04
APOB-202ENST00000399256 COL5A3P25940 1745 aaPredicted RBP15.33■□□□□ 0.04
APOB-202ENST00000399256 ELF1P32519 619 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 CALCRLQ16602 461 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 RAPGEF5Q92565 580 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 ANKS1AQ92625 1134 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 LRRC45Q96CN5 670 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 TMEM47Q9BQJ4 181 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 LRRC4CQ9HCJ2 640 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 ODF2LQ9ULJ1 636 aa15.33■□□□□ 0.04
APOB-202ENST00000399256 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 KIF4AO95239 1232 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 PPP2R2AP63151 447 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 CUL1Q13616 776 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 BYSLQ13895 437 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 ASIC2Q16515 512 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 NELFCDQ8IXH7 590 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 MYOCDQ8IZQ8 938 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 RAD54LQ92698 747 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SYN2Q92777 582 aaPredicted RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 NUCKS1Q9H1E3 243 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 TAF1P21675 1872 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 PALM3A6NDB9 673 aaPredicted RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 PHF20L1A8MW92 1017 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 OPLAHO14841 1288 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SCP2P22307 547 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 MMP14P50281 582 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 MAGOHP61326 146 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 SF3A3Q12874 501 aaKnown RBP eCLIP15.32■□□□□ 0.042e-18■■■■□ 21.7
APOB-202ENST00000399256 ITPK1Q13572 414 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 E2F5Q15329 346 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 CACNA2D3Q8IZS8 1091 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SNX29Q8TEQ0 813 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 FGFBP2Q9BYJ0 223 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 KIAA1551Q9HCM1 1747 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SART1O43290 800 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 DAPK3O43293 454 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 SLC37A4O43826 429 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 FKBP3Q00688 224 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 C12orf60Q5U649 245 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 RIC8AQ9NPQ8 531 aa15.32■□□□□ 0.04
APOB-202ENST00000399256 TPX2Q9ULW0 747 aaKnown RBP15.32■□□□□ 0.04
APOB-202ENST00000399256 TMCO5BA8MYB1 307 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 TDP2O95551 362 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 SCTRP47872 440 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 BIRC3Q13489 604 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 RPAINQ86UA6 219 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 SCFD2Q8WU76 684 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.31■□□□□ 0.04
APOB-202ENST00000399256 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
APOB-202ENST00000399256 ITGA4P13612 1032 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 GNA11P29992 359 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 CRKLP46109 303 aaKnown RBP15.31■□□□□ 0.04
APOB-202ENST00000399256 COASYQ13057 564 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 USP17L2Q6R6M4 530 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 CCDC87Q9NVE4 849 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 AMACRQ9UHK6 382 aa15.31■□□□□ 0.04
APOB-202ENST00000399256 NOC2LQ9Y3T9 749 aaKnown RBP15.31■□□□□ 0.04
APOB-202ENST00000399256 CHRM1P11229 460 aaPredicted RBP15.3■□□□□ 0.04
APOB-202ENST00000399256 KRT71Q3SY84 523 aa15.3■□□□□ 0.04
APOB-202ENST00000399256 ERFEQ4G0M1 354 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms