RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 DNAJC11Q9NVH1 559 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 NMRK1Q9NWW6 199 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SCHIP1Q9P0W5 487 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 CALCOCO1Q9P1Z2 691 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 THEGQ9P2T0 379 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 KLF15Q9UIH9 416 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 BNIP3LO60238 219 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 GCFC2P16383 781 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 ATICP31939 592 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 RFC1P35251 1148 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 CLEC16AQ2KHT3 1053 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 REM2Q8IYK8 340 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 USTQ9Y2C2 406 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SYNGAP1Q96PV0 1343 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 VWA3AA6NCI4 1184 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 VSTM5A8MXK1 200 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 CPB1P15086 417 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 FAM149B1Q96BN6 582 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 NLRP4Q96MN2 994 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 OSBPL9Q96SU4 736 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MMP19Q99542 508 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ARHGAP9Q9BRR9 750 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 NCKAP1Q9Y2A7 1128 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TBX22Q9Y458 520 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PCDHGB3Q9Y5G1 929 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SUPT3HB4E1H0 165 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ARSJQ5FYB0 599 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 BSPRYQ5W0U4 402 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TOGARAM2Q6ZUX3 1019 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 B4GALNT4Q76KP1 1039 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SRBD1Q8N5C6 995 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 NKX2-3Q8TAU0 364 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 OSBP2Q969R2 916 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MRPL48Q96GC5 212 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 ASB14A6NK59 587 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 APOEP02649 317 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PTGS1P23219 599 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 CAPRIN1Q14444 709 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 ZNF568Q3ZCX4 644 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 CLYBLQ8N0X4 340 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 KRT222Q8N1A0 295 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TGFBRAP1Q8WUH2 860 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MAGEF1Q9HAY2 307 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SLC38A7Q9NVC3 462 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 hCG_1984214I3L0E3 225 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 K7ENM7 598 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 GUCA1CO95843 209 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 GJB2P29033 226 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TRPC1P48995 793 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 FAM160A1Q05DH4 1040 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ZBTB17Q13105 803 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TAF1CQ15572 869 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 ALG11Q2TAA5 492 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 HHATQ5VTY9 493 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MIGA2Q7L4E1 593 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SPATA18Q8TC71 538 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 CSGALNACT1Q8TDX6 532 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ARHGEF2Q92974 986 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 STK17AQ9UEE5 414 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PRRC2BQ5JSZ5 2229 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 SPTLC2O15270 562 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MSCO60682 206 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 HPCAP84074 193 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PLD1Q13393 1074 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MICALL2Q8IY33 904 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ZNF557Q8N988 423 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 PCSK9Q8NBP7 692 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 SPACA7Q96KW9 195 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 SUN2Q9UH99 717 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 GRK3P35626 688 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 GNG11P61952 73 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 DMWDQ09019 674 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PPP6R3Q5H9R7 873 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 THEMIS2Q5TEJ8 643 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 DHX58Q96C10 678 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ZBTB18Q99592 522 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ASXL1Q8IXJ9 1541 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ELP1O95163 1332 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 DDAH1O94760 285 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 INHBAP08476 426 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 HOXB7P09629 217 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 HSPD1P10809 573 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 RAG1P15918 1043 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ITGAXP20702 1163 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 TERF1P54274 439 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 RIN2Q8WYP3 895 aaPredicted RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 HSPH1Q92598 858 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 LARP6Q9BRS8 491 aaKnown RBP5.39□□□□□ -1.55
TTC3-204ENST00000399017 KIFC3Q9BVG8 833 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 PSD3Q9NYI0 1048 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SERPINB13Q9UIV8 391 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 MRFAP1Q9Y605 127 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 SYNMO15061 1565 aa5.39□□□□□ -1.55
TTC3-204ENST00000399017 ZNF804BA4D1E1 1349 aa5.38□□□□□ -1.55
TTC3-204ENST00000399017 ZNF644Q9H582 1327 aaPredicted RBP5.38□□□□□ -1.55
TTC3-204ENST00000399017 CDC42BPGQ6DT37 1551 aa5.38□□□□□ -1.55
TTC3-204ENST00000399017 TXKP42681 527 aa5.38□□□□□ -1.55
TTC3-204ENST00000399017 CTSWP56202 376 aa5.38□□□□□ -1.55
TTC3-204ENST00000399017 PDCLQ13371 301 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms