RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 ELAC2Q9BQ52 826 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SNX24Q9Y343 169 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CDK8P49336 464 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC6Q16204 474 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 VSIG1Q86XK7 387 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RIOK1Q9BRS2 568 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SSU72P8A0A1W2PR75 194 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 USP17L5A8MUK1 530 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TPH2Q8IWU9 490 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 AENQ8WTP8 325 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MTRQ99707 1265 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZBTB21Q9ULJ3 1066 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 A0A1W2PQJ5 194 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ATP11AP98196 1134 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PTGISQ16647 500 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KCTD1Q719H9 257 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 IRF2BP1Q8IU81 584 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MSL3Q8N5Y2 521 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CASKIN2Q8WXE0 1202 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NAP1L4Q99733 375 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SEMA6BQ9H3T3 888 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PHF20L1A8MW92 1017 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ECM2O94769 699 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ACTN1P12814 892 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PEX19P40855 299 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BIRC3Q13489 604 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MESDQ14696 234 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SLC18A3Q16572 532 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MYCBPAPQ8TBZ2 947 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FBF1Q8TES7 1133 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NOC2LQ9Y3T9 749 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 A0A087X0T9 212 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC188H7C350 402 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MMEP08473 750 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM228BP0C875 321 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 IL17AQ16552 155 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MEA1Q16626 185 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DNAAF5Q86Y56 855 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NEK9Q8TD19 979 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PSMD1Q99460 953 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 METTL14Q9HCE5 456 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 POTEB3A0JP26 581 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GRID2IPA4D2P6 1211 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SFI1A8K8P3 1242 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 POTECB2RU33 542 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 STX2P32856 288 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZRSR2Q15696 482 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BRINP3Q76B58 766 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RPAINQ86UA6 219 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PROM2Q8N271 834 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 HVCN1Q96D96 273 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PCDHA1Q9Y5I3 950 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TACC3Q9Y6A5 838 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 WTIPA6NIX2 430 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 STXBP3O00186 592 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CTNNA2P26232 953 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DR1Q01658 176 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TNIP1Q15025 636 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 OTUD6AQ7L8S5 288 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CYFIP2Q96F07 1278 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CEP95Q96GE4 821 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TLR10Q9BXR5 811 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TTI1O43156 1089 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PLCB3Q01970 1234 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TCP10Q12799 353 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ARMC9Q7Z3E5 817 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RUBCNQ92622 972 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PACSIN1Q9BY11 444 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM107AO95990 144 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FERP16591 822 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PCK1P35558 622 aa12.1□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KCTD19Q17RG1 926 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms