RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 EML1O00423 815 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 DHX15O43143 795 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 CHMP2AO43633 222 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 ADORA2AP29274 412 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 NLRP12P59046 1061 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 LRMPQ12912 555 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 ITGB3BPQ13352 177 aaPredicted RBP21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 GNPTABQ3T906 1256 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 C17orf99Q6UX52 265 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 LRRC15Q8TF66 581 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 CDHR1Q96JP9 859 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 CAPNS2Q96L46 248 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 CUEDC2Q9H467 287 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 TBC1D22BQ9NU19 505 aa21.61■■□□□ 1.05
PDLIM2-204ENST00000397760 SMTNL1A8MU46 457 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 SLC26A4O43511 780 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 ATP9AO75110 1047 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 PRR29P0C7W0 189 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 SEMA3FQ13275 785 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 ECM1Q16610 540 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 CCDC144BQ3MJ40 725 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 PLEKHH3Q7Z736 793 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 UNC45AQ9H3U1 944 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 KDM3AQ9Y4C1 1321 aa21.6■■□□□ 1.05
PDLIM2-204ENST00000397760 DDX39AO00148 427 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 AOC2O75106 756 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 CRHR2Q13324 411 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 TMEM119Q4V9L6 283 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 HYIQ5T013 277 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 B3GNT9Q6UX72 402 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 STAMQ92783 540 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 NT5C3AQ9H0P0 336 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 LCTP09848 1927 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 SPATA31C2B4DYI2 1134 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 IKBKBO14920 756 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 COBLO75128 1261 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 MED24O75448 989 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 ZNF792Q3KQV3 632 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 AOPEPQ8N6M6 819 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 MTRQ99707 1265 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 EIF2AK1Q9BQI3 630 aaKnown RBP21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 MAGEF1Q9HAY2 307 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 STK17AQ9UEE5 414 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 PCDHA5Q9Y5H7 936 aa21.59■■□□□ 1.05
PDLIM2-204ENST00000397760 RIOK3O14730 519 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 CA12O43570 354 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 RPA1P27694 616 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 SEPT14Q6ZU15 432 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 CATSPER3Q86XQ3 398 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 TUBE1Q9UJT0 475 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 KIAA1024Q9UPX6 916 aa21.58■■□□□ 1.05
PDLIM2-204ENST00000397760 LOC102724159A0A0B4J2E5 919 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 POTEB3A0JP26 581 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 SPATA31C1P0DKV0 1188 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 ICAM3P32942 547 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 GRB14Q14449 540 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 PWP2Q15269 919 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 POTEBQ6S5H4 581 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 POLR3CQ9BUI4 534 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 BLOC1S4Q9NUP1 217 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 KBTBD4Q9NVX7 518 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 ASB14A6NK59 587 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 BIN1O00499 593 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 ALDH1A1P00352 501 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 KCNA2P16389 499 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 CASP1P29466 404 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 KCNJ6P48051 423 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 CYP4A11Q02928 519 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 EPHA7Q15375 998 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 DPP9Q86TI2 863 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 SMARCE1Q969G3 411 aa21.57■■□□□ 1.04
PDLIM2-204ENST00000397760 A0A087WWV3 80 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 SLC15A5A6NIM6 579 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 GTPBP6O43824 516 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 ECM2O94769 699 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 SMC2O95347 1197 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 DPYDQ12882 1025 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 EEPD1Q7L9B9 569 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 MIER3Q7Z3K6 550 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 KCNK18Q7Z418 384 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 MORC4Q8TE76 937 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 LARP4BQ92615 738 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 RAD54LQ92698 747 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 HSD17B14Q9BPX1 270 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 BLZF1Q9H2G9 400 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 RGL1Q9NZL6 768 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 TCEAL9Q9UHQ7 104 aa21.56■■□□□ 1.04
PDLIM2-204ENST00000397760 TNNT1P13805 278 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 SARSP49591 514 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 MCM6Q14566 821 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 NT5DC1Q5TFE4 455 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 SV2BQ7L1I2 683 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 REM2Q8IYK8 340 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 DYDC2Q96IM9 177 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 TUFT1Q9NNX1 390 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 POTEFA5A3E0 1075 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 KIF2AO00139 706 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 KRT76Q01546 638 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 CUL4BQ13620 913 aa21.55■■□□□ 1.04
PDLIM2-204ENST00000397760 DPCR1Q3MIW9 517 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms