RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 MIER3Q7Z3K6 550 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 NPLOC4Q8TAT6 608 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 RAD54LQ92698 747 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 DYDC2Q96IM9 177 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 MAML3Q96JK9 1138 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 SENP7Q9BQF6 1050 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 TSPY26PQ9H489 355 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 TUFT1Q9NNX1 390 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 KRT76Q01546 638 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 LARP4BQ92615 738 aaKnown RBP30.81■■■□□ 2.52
CPNE1-203ENST00000397442 USP6NLQ92738 828 aa30.81■■■□□ 2.52
CPNE1-203ENST00000397442 MGAMO43451 1857 aa30.8■■■□□ 2.52
CPNE1-203ENST00000397442 GTPBP6O43824 516 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-203ENST00000397442 MAP2K2P36507 400 aa30.8■■■□□ 2.52
CPNE1-203ENST00000397442 FBXO16Q8IX29 292 aaPredicted RBP30.8■■■□□ 2.52
CPNE1-203ENST00000397442 E9PMD0 336 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 TGFB3P10600 412 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 MAP2K5Q13163 448 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 CUL4BQ13620 913 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 CTTNQ14247 550 aaKnown RBP30.79■■■□□ 2.52
CPNE1-203ENST00000397442 MCM6Q14566 821 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 ZNF746Q6NUN9 644 aaPredicted RBP30.79■■■□□ 2.52
CPNE1-203ENST00000397442 BLZF1Q9H2G9 400 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 TELO2Q9Y4R8 837 aa30.79■■■□□ 2.52
CPNE1-203ENST00000397442 FSD2A1L4K1 749 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 UBA1P22314 1058 aaKnown RBP30.78■■■□□ 2.52
CPNE1-203ENST00000397442 PSMC6P62333 389 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 JPH1Q9HDC5 661 aaPredicted RBP30.78■■■□□ 2.52
CPNE1-203ENST00000397442 WRAP73Q9P2S5 460 aaPredicted RBP30.78■■■□□ 2.52
CPNE1-203ENST00000397442 GJD2Q9UKL4 321 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 THSD7BQ9C0I4 1608 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 ARIH2O95376 493 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 HOXC6P09630 235 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 NEK9Q8TD19 979 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 SMARCE1Q969G3 411 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 CFHR5Q9BXR6 569 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 SLC9A2Q9UBY0 812 aa30.78■■■□□ 2.52
CPNE1-203ENST00000397442 ZSWIM8A7E2V4 1837 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 BIN1O00499 593 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 SNAI1O95863 264 aaPredicted RBP30.77■■■□□ 2.52
CPNE1-203ENST00000397442 MUTP22033 750 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 SFNP31947 248 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 JAK3P52333 1124 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 SV2BQ7L1I2 683 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 TPH2Q8IWU9 490 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 KATNBL1Q9H079 304 aa30.77■■■□□ 2.52
CPNE1-203ENST00000397442 DDX41Q9UJV9 622 aaKnown RBP30.77■■■□□ 2.52
CPNE1-203ENST00000397442 WDR64B1ANS9 1081 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 TBC1D8O95759 1140 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 MYL1P05976 194 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 CCDC62Q6P9F0 684 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 KCTD17Q8N5Z5 321 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 BANK1Q8NDB2 785 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 RDM1Q8NG50 284 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 LXNQ9BS40 222 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.76■■■□□ 2.51
CPNE1-203ENST00000397442 SLC5A4Q9NY91 659 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 MAN1B1Q9UKM7 699 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 SAMM50Q9Y512 469 aa30.76■■■□□ 2.51
CPNE1-203ENST00000397442 WDR81Q562E7 1941 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 TNPO2O14787 897 aaKnown RBP30.75■■■□□ 2.51
CPNE1-203ENST00000397442 DHX8Q14562 1220 aaKnown RBP30.75■■■□□ 2.51
CPNE1-203ENST00000397442 STX1AQ16623 288 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 KCNV1Q6PIU1 500 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 CYFIP1Q7L576 1253 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 C7orf25Q9BPX7 421 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 TINF2Q9BSI4 451 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 TRIM9Q9C026 710 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 PDGFCQ9NRA1 345 aa30.75■■■□□ 2.51
CPNE1-203ENST00000397442 SORBS3O60504 671 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 SMC2O95347 1197 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 P4HBP07237 508 aaKnown RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 LY6KQ17RY6 165 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 TAPT1Q6NXT6 567 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 SMAP1Q8IYB5 467 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 ARHGAP39Q9C0H5 1083 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 RBSNQ9H1K0 784 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 VTA1Q9NP79 307 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 RNF186Q9NXI6 227 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 TCEAL9Q9UHQ7 104 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 SYNGAP1Q96PV0 1343 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 MYMKA6NI61 221 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 FARP2O94887 1054 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 PLA2G4BP0C869 781 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 BMP6P22004 513 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 ACTR2P61160 394 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 LACTBP83111 547 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 ANO6Q4KMQ2 910 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 ISM2Q6H9L7 571 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 MSL3Q8N5Y2 521 aaKnown RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 GIMAP8Q8ND71 665 aaPredicted RBP30.74■■■□□ 2.51
CPNE1-203ENST00000397442 GSDMAQ96QA5 445 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 DNM3Q9UQ16 869 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 PCDHA10Q9Y5I2 948 aa30.74■■■□□ 2.51
CPNE1-203ENST00000397442 SLC12A3P55017 1021 aa30.73■■■□□ 2.51
CPNE1-203ENST00000397442 NLRP12P59046 1061 aa30.73■■■□□ 2.51
CPNE1-203ENST00000397442 AMPD3Q01432 767 aa30.73■■■□□ 2.51
CPNE1-203ENST00000397442 NEDD9Q14511 834 aa30.73■■■□□ 2.51
CPNE1-203ENST00000397442 DPCR1Q3MIW9 517 aa30.73■■■□□ 2.51
CPNE1-203ENST00000397442 SOCS4Q8WXH5 440 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms