RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF333Q96JL9 665 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 CLIC6Q96NY7 704 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 GBP4Q96PP9 640 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 SAMM50Q9Y512 469 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 ELP1O95163 1332 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 PDIA5Q14554 519 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 CSPP1Q1MSJ5 1256 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 HSDL1Q3SXM5 330 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 AFG1LQ8WV93 481 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 RNF208Q9H0X6 261 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 LRWD1Q9UFC0 647 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 PCDHA7Q9UN72 937 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 POTEFA5A3E0 1075 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 WDR64B1ANS9 1081 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 EML1O00423 815 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 CUTAO60888 179 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 LONP1P36776 959 aaKnown RBP26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 JAK3P52333 1124 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 SMAP1Q8IYB5 467 aaPredicted RBP26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 IGSF22Q8N9C0 903 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 PPTC7Q8NI37 304 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 SEPT1Q8WYJ6 367 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 GPR20Q99678 358 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 CSRNP2Q9H175 543 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 SPC25Q9HBM1 224 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 XPNPEP3Q9NQH7 507 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 DISC1Q9NRI5 854 aa26.56■■□□□ 1.84
TSPAN4-203ENST00000397397 SYNRGQ9UMZ2 1314 aa26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 CENPFP49454 3210 aa26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 SFNP31947 248 aa26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 GJA9P57773 515 aa26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 UPF3AQ9H1J1 476 aaKnown RBP26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 PAK6Q9NQU5 681 aaPredicted RBP26.55■■□□□ 1.84
TSPAN4-203ENST00000397397 FRMPD3Q5JV73 1810 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 GSTTP1A0A1W2PQM5 241 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 PGK1P00558 417 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 C6orf222P0C671 652 aaPredicted RBP26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 LHX8Q68G74 356 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 MIS18BP1Q6P0N0 1132 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 RDM1Q8NG50 284 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 PCDHA10Q9Y5I2 948 aa26.54■■□□□ 1.84
TSPAN4-203ENST00000397397 PP2D1A8MPX8 630 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 PSAPP07602 524 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 MMP3P08254 477 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 CPT1AP50416 773 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 IRX5P78411 483 aaPredicted RBP26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 EPHA7Q15375 998 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 BRDTQ58F21 947 aaPredicted RBP26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 SPECC1Q5M775 1068 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 AXDND1Q5T1B0 1012 aaPredicted RBP26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 ABHD15Q6UXT9 468 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 ERMNQ8TAM6 284 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 AK8Q96MA6 479 aa26.53■■□□□ 1.84
TSPAN4-203ENST00000397397 A6NJR5 290 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 ATG7O95352 703 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 SUPT20HL2P0C7V6 817 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 TCF7P36402 384 aaPredicted RBP26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 BEX3Q00994 111 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 FSCN1Q16658 493 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 TPRNQ4KMQ1 711 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 ZNF579Q8NAF0 562 aaKnown RBP26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 DEFB118Q96PH6 123 aa26.52■■□□□ 1.84
TSPAN4-203ENST00000397397 MYADML2A6NDP7 307 aa26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 ADAMTS4O75173 837 aa26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 MYCNP04198 464 aaPredicted RBP26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 CDC25AP30304 524 aa26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 UTP14CQ5TAP6 766 aaKnown RBP26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 EIF2AK1Q9BQI3 630 aaKnown RBP26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 STK24Q9Y6E0 443 aa26.51■■□□□ 1.83
TSPAN4-203ENST00000397397 BACH1O14867 736 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 CTAGE5O15320 804 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 NKX3-2P78367 333 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 DGKDQ16760 1214 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 GNASQ5JWF2 1037 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 KRT79Q5XKE5 535 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 ADALQ6DHV7 355 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 TMEM87AQ8NBN3 555 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 SNX29Q8TEQ0 813 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 WDR81Q562E7 1941 aa26.5■■□□□ 1.83
TSPAN4-203ENST00000397397 GOLGA6L4A6NEF3 574 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 PPFIA4O75335 1185 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 UBA7P41226 1012 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 HAUS3Q68CZ6 603 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 SWSAP1Q6NVH7 229 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 SYMPKQ92797 1274 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 DYDC2Q96IM9 177 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 RGL1Q9NZL6 768 aa26.49■■□□□ 1.83
TSPAN4-203ENST00000397397 MYL3P08590 195 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 HOXD8P13378 290 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 CCT6AP40227 531 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 CYP4A11Q02928 519 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 SHC4Q6S5L8 630 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 USP49Q70CQ1 688 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 RNF180Q86T96 592 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 CABP7Q86V35 215 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 CCDC60Q8IWA6 550 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 BANK1Q8NDB2 785 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 KLHDC9Q8NEP7 349 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 NEK9Q8TD19 979 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 EPSTI1Q96J88 318 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms