RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 ACACBO00763 2458 aa11.02□□□□□ -0.64
NEDD9-203ENST00000397378 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.64
NEDD9-203ENST00000397378 HAS3O00219 553 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 CWF19L1Q69YN2 538 aaKnown RBP11.02□□□□□ -0.65
NEDD9-203ENST00000397378 CCDC105Q8IYK2 499 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 KLHL23Q8NBE8 558 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 SPPL3Q8TCT6 385 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 MICAL1Q8TDZ2 1067 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 NSUN6Q8TEA1 469 aaKnown RBP11.02□□□□□ -0.65
NEDD9-203ENST00000397378 ATP6V0A1Q93050 837 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 IWS1Q96ST2 819 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 R4GN57 208 aa11.02□□□□□ -0.65
NEDD9-203ENST00000397378 EP300Q09472 2414 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 MYO10Q9HD67 2058 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 SRGAP2BP0DMP2 458 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 HOXD8P13378 290 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 STXBP2Q15833 593 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 NAALADL2Q58DX5 795 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 GPATCH4Q5T3I0 446 aaKnown RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 VPS53Q5VIR6 699 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 VN1R2Q8NFZ6 395 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 PPTC7Q8NI37 304 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 SYTL5Q8TDW5 730 aaPredicted RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 RUBCNQ92622 972 aa11.01□□□□□ -0.65
NEDD9-203ENST00000397378 RC3H2Q9HBD1 1191 aaKnown RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 DDX41Q9UJV9 622 aaKnown RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 MRPL42Q9Y6G3 142 aaKnown RBP11.01□□□□□ -0.65
NEDD9-203ENST00000397378 FSD2A1L4K1 749 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 C2CD4DB7Z1M9 353 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 PI15O43692 258 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 PPFIA3O75145 1194 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 PCP11498 1178 aaKnown RBP11□□□□□ -0.65
NEDD9-203ENST00000397378 AOC1P19801 751 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 TECP42680 631 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 LAMC2Q13753 1193 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 USH1GQ495M9 461 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
NEDD9-203ENST00000397378 KIAA0319Q5VV43 1072 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 DCLK2Q8N568 766 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 DTWD2Q8NBA8 298 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 TBC1D5Q92609 795 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 COL26A1Q96A83 441 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 ZNF689Q96CS4 500 aaPredicted RBP11□□□□□ -0.65
NEDD9-203ENST00000397378 TAAR1Q96RJ0 339 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 RMDN3Q96TC7 470 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 TOMM22Q9NS69 142 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 COL20A1Q9P218 1284 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 ABCB11O95342 1321 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 MAP1BP46821 2468 aaKnown RBP11□□□□□ -0.65
NEDD9-203ENST00000397378 LAMA4Q16363 1823 aa11□□□□□ -0.65
NEDD9-203ENST00000397378 WDR87Q6ZQQ6 2873 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 TREHO43280 583 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 CAND2O75155 1236 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 PPFIA4O75335 1185 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 EIF3JO75822 258 aaKnown RBP10.99□□□□□ -0.65
NEDD9-203ENST00000397378 DGKIO75912 1065 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 FGAP02671 866 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 ASGR2P07307 311 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 ACAP1Q15027 740 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 DUSP6Q16828 381 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 PAN2Q504Q3 1202 aaKnown RBP10.99□□□□□ -0.65
NEDD9-203ENST00000397378 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 MCF2L2Q86YR7 1114 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 ATP8B4Q8TF62 1192 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 S1PR5Q9H228 398 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 HELLSQ9NRZ9 838 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 MRVI1Q9Y6F6 885 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 ZMYM6O95789 1325 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 DOCK5Q9H7D0 1870 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 FRYLO94915 3013 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 TTC3P53804 2025 aa10.99□□□□□ -0.65
NEDD9-203ENST00000397378 SORBS3O60504 671 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 NR3C2P08235 984 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 ARP10275 920 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 GHRP10912 638 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 MX1P20591 662 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 HOXC8P31273 242 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-203ENST00000397378 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 LLGL2Q6P1M3 1020 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 ZC3H14Q6PJT7 736 aaKnown RBP10.98□□□□□ -0.65
NEDD9-203ENST00000397378 PIAS4Q8N2W9 510 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-203ENST00000397378 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-203ENST00000397378 CDCA3Q99618 268 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-203ENST00000397378 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 CDH22Q9UJ99 828 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
NEDD9-203ENST00000397378 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 SMIM10L2AP0DMW4 78 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 SMIM10L2BP0DMW5 78 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 SDHBP21912 280 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 ATXN1P54253 815 aaKnown RBP10.97□□□□□ -0.65
NEDD9-203ENST00000397378 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 SYCE2Q6PIF2 218 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
NEDD9-203ENST00000397378 CMTR2Q8IYT2 770 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms