RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 PPP6R2O75170 966 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 MARCKSP29966 332 aaPredicted RBP14.99□□□□□ -0.01
SEC13-209ENST00000397117 TNFAIP2Q03169 654 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 PTPAQ15257 358 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 RAB30Q15771 203 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 FCHSD1Q86WN1 690 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 SAMD3Q8N6K7 520 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 CLEC4DQ8WXI8 215 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 ASB2Q96Q27 587 aa14.99□□□□□ -0.01
SEC13-209ENST00000397117 CXXC1Q9P0U4 656 aaPredicted RBP14.99□□□□□ -0.01
SEC13-209ENST00000397117 GNEQ9Y223 722 aaKnown RBP14.99□□□□□ -0.01
SEC13-209ENST00000397117 GRIN2DO15399 1336 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 FGBP02675 491 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 COL9A1P20849 921 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 MUM1L1Q5H9M0 696 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 NAP1L4Q99733 375 aaKnown RBP14.98□□□□□ -0.01
SEC13-209ENST00000397117 MAP3K20Q9NYL2 800 aaKnown RBP14.98□□□□□ -0.01
SEC13-209ENST00000397117 MSRAQ9UJ68 235 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 PCDHA7Q9UN72 937 aa14.98□□□□□ -0.01
SEC13-209ENST00000397117 UMODL1Q5DID0 1318 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 MUC3AQ02505 3323 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 WNT7AO00755 349 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 CABYRO75952 493 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 HSD17B4P51659 736 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 PTGDRQ13258 359 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 ORC2Q13416 577 aaPredicted RBP14.97□□□□□ -0.01
SEC13-209ENST00000397117 CXCL17Q6UXB2 119 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 RNF207Q6ZRF8 634 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 KRI1Q8N9T8 703 aaKnown RBP14.97□□□□□ -0.01
SEC13-209ENST00000397117 TBC1D5Q92609 795 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 NKX2-4Q9H2Z4 354 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 ACAD9Q9H845 621 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 A1CFQ9NQ94 594 aaKnown RBP14.97□□□□□ -0.01
SEC13-209ENST00000397117 THEGQ9P2T0 379 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 YBX2Q9Y2T7 364 aaKnown RBP14.97□□□□□ -0.01
SEC13-209ENST00000397117 LRRC37A2A6NM11 1700 aa14.97□□□□□ -0.01
SEC13-209ENST00000397117 USP11P51784 963 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 KLHL40Q2TBA0 621 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 ADALQ6DHV7 355 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 NSMFQ6X4W1 530 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 VWCEQ96DN2 955 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 SEZ6LQ9BYH1 1024 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 HIPK3Q9H422 1215 aa14.96□□□□□ -0.01
SEC13-209ENST00000397117 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
SEC13-209ENST00000397117 TCF20Q9UGU0 1960 aaKnown RBP14.96□□□□□ -0.01
SEC13-209ENST00000397117 LCTP09848 1927 aa14.96□□□□□ -0.02
SEC13-209ENST00000397117 ASB14A6NK59 587 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 LAD1O00515 517 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 NEMFO60524 1076 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 CUTAO60888 179 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 GCFC2P16383 781 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 SMPD1P17405 629 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 SREBF1P36956 1147 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 MRPS5P82675 430 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 ARHGAP4P98171 946 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 ATP2C1P98194 919 aaPredicted RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 GHRHRQ02643 423 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 ITGA7Q13683 1181 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 CCDC85BQ15834 202 aaPredicted RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 GPT2Q8TD30 523 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 MAF1Q9H063 256 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 MTIF3Q9H2K0 278 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 CHD7Q9P2D1 2997 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 DYNC1LI2O43237 492 aaPredicted RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 PTGS1P23219 599 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 ZNF76P36508 570 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 RPS6P62753 249 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 FSCN1Q16658 493 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 IQSEC1Q6DN90 963 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 PPP4R3AQ6IN85 833 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 TAPT1Q6NXT6 567 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 OTOP2Q7RTS6 562 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 TLK2Q86UE8 772 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 ADAMTS19Q8TE59 1207 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 AP5M1Q9H0R1 490 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 TRPV6Q9H1D0 765 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 SLC28A3Q9HAS3 691 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 DDX25Q9UHL0 483 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 Q9Y3F1 56 aa14.95□□□□□ -0.02
SEC13-209ENST00000397117 SRPRBQ9Y5M8 271 aaKnown RBP14.95□□□□□ -0.02
SEC13-209ENST00000397117 A0A1W2PQ27 194 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 A0A1W2PQ64 194 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 A0A1W2PQD8 194 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 TDP2O95551 362 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 IGFBP4P22692 258 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 CCL23P55773 120 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 BAATQ14032 418 aaPredicted RBP14.94□□□□□ -0.02
SEC13-209ENST00000397117 TMEM63BQ5T3F8 832 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 ARL6IP4Q66PJ3 421 aaKnown RBP14.94□□□□□ -0.02
SEC13-209ENST00000397117 CCDC73Q6ZRK6 1079 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 SYTL5Q8TDW5 730 aaPredicted RBP14.94□□□□□ -0.02
SEC13-209ENST00000397117 WNT8AQ9H1J5 351 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 PDGFCQ9NRA1 345 aa14.94□□□□□ -0.02
SEC13-209ENST00000397117 FBXO2Q9UK22 296 aaPredicted RBP14.94□□□□□ -0.02
SEC13-209ENST00000397117 MARCH6O60337 910 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 B4GALT4O60513 344 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 CALCRLQ16602 461 aa14.93□□□□□ -0.02
SEC13-209ENST00000397117 AXDND1Q5T1B0 1012 aaPredicted RBP14.93□□□□□ -0.02
SEC13-209ENST00000397117 MOXD1Q6UVY6 613 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms