RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 LZTS2Q9BRK4 669 aa20.19■□□□□ 0.82
EXOSC3-202ENST00000396521 POTEB3A0JP26 581 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 FAM86C2PA6NEL3 165 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 DCXO43602 365 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 KIF5BP33176 963 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 ARHGAP4P98171 946 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 TCEAL5Q5H9L2 206 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 POTEBQ6S5H4 581 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 NCOA7Q8NI08 942 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 LMBR1Q8WVP7 490 aa20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 TNPO1Q92973 898 aaKnown RBP20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 POP1Q99575 1024 aaKnown RBP20.18■□□□□ 0.82
EXOSC3-202ENST00000396521 MYH6P13533 1939 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 BMPR1AP36894 532 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 SLC35G1Q2M3R5 365 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 ADHFE1Q8IWW8 467 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 GPRASP2Q96D09 838 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 RRP36Q96EU6 259 aaKnown RBP20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 MTA3Q9BTC8 594 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 PLVAPQ9BX97 442 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 SPZ1Q9BXG8 430 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 EHMT1Q9H9B1 1298 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 RTEL1Q9NZ71 1219 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 MICAL3Q7RTP6 2002 aa20.17■□□□□ 0.82
EXOSC3-202ENST00000396521 MYH7BA7E2Y1 1941 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 MAFGO15525 162 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 IGHDP01880 384 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 GNAQP50148 359 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 SEMA3FQ13275 785 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 TMTC2Q8N394 836 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 CLP1Q92989 425 aaKnown RBP20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 PPP2R3CQ969Q6 453 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 ZFP91Q96JP5 570 aaPredicted RBP20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 BCAS3Q9H6U6 928 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 ERAP1Q9NZ08 941 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 SEC63Q9UGP8 760 aaKnown RBP20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 SQORQ9Y6N5 450 aa20.16■□□□□ 0.82
EXOSC3-202ENST00000396521 C19orf67A6NJJ6 358 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CHRNA1P02708 482 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CYP21A2P08686 494 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CTNNB1P35222 781 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 ZP2Q05996 745 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 NAALADL2Q58DX5 795 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 UTP14CQ5TAP6 766 aaKnown RBP20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CTCFLQ8NI51 663 aaPredicted RBP20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 SEPT1Q8WYJ6 367 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 CLDND1Q9NY35 253 aa20.15■□□□□ 0.82
EXOSC3-202ENST00000396521 ADGRA3Q8IWK6 1321 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 DDAH1O94760 285 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 TCF7P36402 384 aaPredicted RBP20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 PPFIA1Q13136 1202 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 EP400NLQ6ZTU2 488 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 TRIM50Q86XT4 487 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 TEX2Q8IWB9 1127 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 FTHL17Q9BXU8 183 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 SMARCAD1Q9H4L7 1026 aa20.14■□□□□ 0.81
EXOSC3-202ENST00000396521 MBLAC1A4D2B0 266 aaPredicted RBP20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 RRN3P2A6NIE6 340 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 E7EWF7 191 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 ENPP3O14638 875 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 MEIS2O14770 477 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 SMAD2Q15796 467 aaKnown RBP20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 IGDCC4Q8TDY8 1250 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 UIMC1Q96RL1 719 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 TUBE1Q9UJT0 475 aa20.13■□□□□ 0.81
EXOSC3-202ENST00000396521 GHRP10912 638 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 BTG3Q14201 252 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 LPIN1Q14693 890 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 IER5Q5VY09 327 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 USP17L6PQ6QN14 398 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 TSHZ1Q6ZSZ6 1077 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 P2RX5Q93086 422 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 ZNF689Q96CS4 500 aaPredicted RBP20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 OSBPL7Q9BZF2 842 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 PSTPIP2Q9H939 334 aa20.12■□□□□ 0.81
EXOSC3-202ENST00000396521 MMP1P03956 469 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 LTBRP36941 435 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 SP4Q02446 784 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 MGAT3Q09327 533 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 GRIK4Q16099 956 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 TTC22Q5TAA0 569 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 GLG1Q92896 1179 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 IL25Q9H293 177 aa20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 RC3H2Q9HBD1 1191 aaKnown RBP20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 RNF216Q9NWF9 866 aaPredicted RBP20.11■□□□□ 0.81
EXOSC3-202ENST00000396521 DGKIO75912 1065 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 LINC00271P0C7V0 271 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 KCNA2P16389 499 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 SMAD4Q13485 552 aaKnown RBP20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 FBXO47Q5MNV8 452 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 ZNF654Q8IZM8 581 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 MFSD14AQ96MC6 490 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 SENP2Q9HC62 589 aa20.1■□□□□ 0.81
EXOSC3-202ENST00000396521 SPDYE3A6NKU9 549 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 GRM6O15303 877 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 STAG3L1P0CL83 205 aa20.09■□□□□ 0.81
EXOSC3-202ENST00000396521 CALM1P0DP23 149 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms