RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 IGFBP4P22692 258 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 CCDC85BQ15834 202 aaPredicted RBP20.95■□□□□ 0.94
FXN-203ENST00000396366 PPP1R18Q6NYC8 613 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 SPRED2Q7Z698 418 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 CDHR1Q96JP9 859 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 MXRA8Q9BRK3 442 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 REV3LO60673 3130 aa20.95■□□□□ 0.94
FXN-203ENST00000396366 VCANP13611 3396 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 PARNO95453 639 aaKnown RBP20.94■□□□□ 0.94
FXN-203ENST00000396366 ARP10275 920 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 KCNJ6P48051 423 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 RCAN1P53805 252 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 ADAM17P78536 824 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 ARHGAP4P98171 946 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 PFKFB3Q16875 520 aaPredicted RBP20.94■□□□□ 0.94
FXN-203ENST00000396366 LMBR1Q8WVP7 490 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 SEPT1Q8WYJ6 367 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 COL25A1Q9BXS0 654 aaPredicted RBP20.94■□□□□ 0.94
FXN-203ENST00000396366 ANO3Q9BYT9 981 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 KCNH7Q9NS40 1196 aa20.94■□□□□ 0.94
FXN-203ENST00000396366 ZNF215Q9UL58 517 aaPredicted RBP20.94■□□□□ 0.94
FXN-203ENST00000396366 LCHNA4D1U4 455 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 EPOPA6NHQ4 379 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 LGR5O75473 907 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 REC8O95072 547 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 CTSHP09668 335 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 MARK3P27448 753 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 CLK2P49760 499 aaKnown RBP20.93■□□□□ 0.94
FXN-203ENST00000396366 TAP1Q03518 808 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 PKN1Q16512 942 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 JAKMIP3Q5VZ66 844 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 DBF4BQ8NFT6 615 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 PHKBQ93100 1093 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 AGXT2Q9BYV1 514 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 EHMT1Q9H9B1 1298 aa20.93■□□□□ 0.94
FXN-203ENST00000396366 KAT6AQ92794 2004 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 MAFGO15525 162 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 TLL1O43897 1013 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 FOSP01100 380 aaPredicted RBP20.92■□□□□ 0.94
FXN-203ENST00000396366 NEFLP07196 543 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 SCG2P13521 617 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 IKBKEQ14164 716 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.92■□□□□ 0.94
FXN-203ENST00000396366 UIMC1Q96RL1 719 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 PCYT2Q99447 389 aa20.92■□□□□ 0.94
FXN-203ENST00000396366 CCDC196A0A1B0GTZ2 297 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 ABHD14A-ACY1A0A1B0GW23 586 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 KIF28PB7ZC32 967 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 hCG_1984214I3L0E3 225 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 CCT2P78371 535 aaKnown RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 ITGB3BPQ13352 177 aaPredicted RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 CEP55Q53EZ4 464 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 FAM117BQ6P1L5 589 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 RUFY4Q6ZNE9 571 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 FBXL16Q8N461 479 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 ZNF713Q8N859 430 aaPredicted RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 GLG1Q92896 1179 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 ZBTB10Q96DT7 871 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 LARP6Q9BRS8 491 aaKnown RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 ZBED2Q9BTP6 218 aa20.91■□□□□ 0.94
FXN-203ENST00000396366 NCOA5Q9HCD5 579 aaKnown RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 AGO4Q9HCK5 861 aaKnown RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 JPH1Q9HDC5 661 aaPredicted RBP20.91■□□□□ 0.94
FXN-203ENST00000396366 PRPF3O43395 683 aaKnown RBP20.9■□□□□ 0.94
FXN-203ENST00000396366 GNAT1P11488 350 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 PSMA5P28066 241 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 PDIA3P30101 505 aaKnown RBP20.9■□□□□ 0.94
FXN-203ENST00000396366 SREBF1P36956 1147 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 NTRK3Q16288 839 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 ARNTL2Q8WYA1 636 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 ZSWIM6Q9HCJ5 1215 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 ERAP1Q9NZ08 941 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 SLC9A2Q9UBY0 812 aa20.9■□□□□ 0.94
FXN-203ENST00000396366 NID2Q14112 1375 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 EMSYQ7Z589 1322 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 NRCAMQ92823 1304 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 MEIS1O00470 390 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 PPFIA1Q13136 1202 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 MKRN4PQ13434 485 aaPredicted RBP20.89■□□□□ 0.93
FXN-203ENST00000396366 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.93
FXN-203ENST00000396366 PLEKHG4Q58EX7 1191 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 MARCH8Q5T0T0 291 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 RUFY3Q7L099 469 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 SMARCAD1Q9H4L7 1026 aa20.89■□□□□ 0.93
FXN-203ENST00000396366 SPTBN5Q9NRC6 3674 aaKnown RBP20.89■□□□□ 0.93
FXN-203ENST00000396366 FAM86B1E9PN63 330 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 GJB5O95377 273 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 CHRNA1P02708 482 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 FAM86B2P0C5J1 330 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 ZNF76P36508 570 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 ACTR2P61160 394 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 AP3B2Q13367 1082 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 GRIK4Q16099 956 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 KRT40Q6A162 431 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 MICALL1Q8N3F8 863 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 SLC26A6Q9BXS9 759 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 ZMYND12Q9H0C1 365 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 GLT8D2Q9H1C3 349 aa20.88■□□□□ 0.93
FXN-203ENST00000396366 MICAL3Q7RTP6 2002 aa20.87■□□□□ 0.93
FXN-203ENST00000396366 DDX39AO00148 427 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms