RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 RTN1Q16799 776 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 TRIM50Q86XT4 487 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 GDPD5Q8WTR4 605 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 LMBR1Q8WVP7 490 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 C1QTNF1Q9BXJ1 281 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 JPH1Q9HDC5 661 aaPredicted RBP18.73■□□□□ 0.59
DDR1-229ENST00000396342 TRPC6Q9Y210 931 aa18.73■□□□□ 0.59
DDR1-229ENST00000396342 TFF2Q03403 129 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 UBE2SQ16763 222 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 IER5Q5VY09 327 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 MCTP2Q6DN12 878 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 DHX32Q7L7V1 743 aaKnown RBP18.72■□□□□ 0.59
DDR1-229ENST00000396342 RAB11FIP4Q86YS3 637 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 WNT8BQ93098 351 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 LRRC2Q9BYS8 371 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 JADE2Q9NQC1 790 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 TUBE1Q9UJT0 475 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 RWDD3Q9Y3V2 267 aa18.72■□□□□ 0.59
DDR1-229ENST00000396342 hCG_1642624A0A1W2PR95 340 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 EPOPA6NHQ4 379 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 CDC45O75419 566 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 MARK3P27448 753 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 HOXC8P31273 242 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 AKAP17AQ02040 695 aaKnown RBP18.71■□□□□ 0.59
DDR1-229ENST00000396342 SEMA3FQ13275 785 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 MBTPS1Q14703 1052 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 GRIK4Q16099 956 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.71■□□□□ 0.59
DDR1-229ENST00000396342 CCDC12Q8WUD4 166 aaPredicted RBP18.71■□□□□ 0.59
DDR1-229ENST00000396342 IL17RAQ96F46 866 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 SUGCTQ9HAC7 445 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 RNF216Q9NWF9 866 aaPredicted RBP18.71■□□□□ 0.59
DDR1-229ENST00000396342 SLC9A2Q9UBY0 812 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 FAM50BQ9Y247 325 aa18.71■□□□□ 0.59
DDR1-229ENST00000396342 GOLGA8AA7E2F4 631 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 GOLGA8BA8MQT2 603 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 BMP1P13497 986 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 IGBP1P78318 339 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 TIGD5Q53EQ6 642 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 APOA5Q6Q788 366 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 FIBCD1Q8N539 461 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 TOP1MTQ969P6 601 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 BCAS3Q9H6U6 928 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 RIC8AQ9NPQ8 531 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 UBIAD1Q9Y5Z9 338 aa18.7■□□□□ 0.58
DDR1-229ENST00000396342 MYH6P13533 1939 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 KCNA2P16389 499 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 ITGB5P18084 799 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 KCNQ1P51787 676 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 AP3B2Q13367 1082 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 HIC1Q14526 733 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 FAM26DQ5JW98 314 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 FAM160B1Q5W0V3 765 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 KRT40Q6A162 431 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 RPAINQ86UA6 219 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 V9GY48 417 aaPredicted RBP18.69■□□□□ 0.58
DDR1-229ENST00000396342 MYO9BQ13459 2157 aa18.69■□□□□ 0.58
DDR1-229ENST00000396342 KLF18A0A0U1RQI7 1052 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 SMCO2A6NFE2 343 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 BACH1O14867 736 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 ARHGEF15O94989 841 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 GHRP10912 638 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 SLC26A2P50443 739 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 HTRA4P83105 476 aaPredicted RBP18.68■□□□□ 0.58
DDR1-229ENST00000396342 GPM6BQ13491 265 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 PUS10Q3MIT2 529 aaKnown RBP18.68■□□□□ 0.58
DDR1-229ENST00000396342 ODR4Q5SWX8 454 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 EP400NLQ6ZTU2 488 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 MRPL38Q96DV4 380 aaKnown RBP18.68■□□□□ 0.58
DDR1-229ENST00000396342 KCNH7Q9NS40 1196 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 TANC1Q9C0D5 1861 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 KIAA1217Q5T5P2 1943 aa18.68■□□□□ 0.58
DDR1-229ENST00000396342 TTC28Q96AY4 2481 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 NCK2O43639 380 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 ATP9AO75110 1047 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 STAT5BP51692 787 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 RCAN1P53805 252 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 EPC2Q52LR7 807 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 CEP55Q53EZ4 464 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 FAM43BQ6ZT52 329 aaPredicted RBP18.67■□□□□ 0.58
DDR1-229ENST00000396342 TMEM192Q8IY95 271 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 PPP2R3CQ969Q6 453 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 C17orf80Q9BSJ5 609 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 C11orf84Q9BUA3 381 aaPredicted RBP18.67■□□□□ 0.58
DDR1-229ENST00000396342 FTHL17Q9BXU8 183 aa18.67■□□□□ 0.58
DDR1-229ENST00000396342 FAM49AQ9H0Q0 323 aaPredicted RBP18.67■□□□□ 0.58
DDR1-229ENST00000396342 UNC80Q8N2C7 3258 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 GSTTP1A0A1W2PQM5 241 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 STAG3L1P0CL83 205 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 CTNNB1P35222 781 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 METAP2P50579 478 aaKnown RBP eCLIP18.66■□□□□ 0.583e-6■■■■□ 25.7
DDR1-229ENST00000396342 MRPS6P82932 125 aaKnown RBP18.66■□□□□ 0.58
DDR1-229ENST00000396342 TCTN1Q2MV58 587 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 TSHZ1Q6ZSZ6 1077 aa18.66■□□□□ 0.58
DDR1-229ENST00000396342 PLPPR4Q7Z2D5 763 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms