RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RBM23Q86U06 439 aaKnown RBP16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 FTSJ3Q8IY81 847 aaKnown RBP16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 LINC01599Q8WXQ3 324 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 MRVI1Q9Y6F6 885 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 GPR179Q6PRD1 2367 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 H3BRB1 525 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 ZFYP08048 801 aaPredicted RBP16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 SLC3A2P08195 630 aaKnown RBP16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 SP2Q02086 613 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 MTMR3Q13615 1198 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 DUSP6Q16828 381 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 CWF19L1Q69YN2 538 aaKnown RBP16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 SYCE2Q6PIF2 218 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 RMDN3Q96TC7 470 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 TUT1Q9H6E5 874 aaKnown RBP16.06■□□□□ 0.16
VCPKMT-201ENST00000395859 ORC4O43929 436 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 NR3C2P08235 984 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 TOP1P11387 765 aaKnown RBP16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 MGAT3Q09327 533 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 LPIN1Q14693 890 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 SPATA33Q96N06 139 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 SEC62Q99442 399 aaKnown RBP16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 NACAP1Q9BZK3 213 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 TLE6Q9H808 572 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 ANAPC4Q9UJX5 808 aa16.05■□□□□ 0.16
VCPKMT-201ENST00000395859 PER2O15055 1255 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 LGALS2P05162 132 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 GHRHRQ02643 423 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 CTDSPL2Q05D32 466 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 USH1GQ495M9 461 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 RASGRP4Q8TDF6 673 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 NEK1Q96PY6 1258 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 NAPBQ9H115 298 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 PXMP2Q9NR77 195 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
VCPKMT-201ENST00000395859 FSCN2O14926 492 aa16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 GGPS1O95749 300 aa16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 UBA1P22314 1058 aaKnown RBP16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 ANKRD54Q6NXT1 300 aa16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 CCDC105Q8IYK2 499 aa16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 SETD4Q9NVD3 440 aa16.03■□□□□ 0.16
VCPKMT-201ENST00000395859 ABCB11O95342 1321 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 C2CD4DB7Z1M9 353 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 GHRP10912 638 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 NPR3P17342 541 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 EIF2AK2P19525 551 aaKnown RBP16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 UBE3AQ05086 875 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 ZBTB33Q86T24 672 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 BCL11AQ9H165 835 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 SEMA4AQ9H3S1 761 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 ECHDC1Q9NTX5 307 aa16.02■□□□□ 0.16
VCPKMT-201ENST00000395859 OPLAHO14841 1288 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 PI15O43692 258 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 RANBP6O60518 1105 aaKnown RBP16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 TGFB3P10600 412 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 AOC1P19801 751 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 ANGPT1Q15389 498 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 FBXO47Q5MNV8 452 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 KCNV1Q6PIU1 500 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 GPKOWQ92917 476 aaPredicted RBP eCLIP16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 CPVLQ9H3G5 476 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 CDH22Q9UJ99 828 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 NR2E1Q9Y466 385 aa16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
VCPKMT-201ENST00000395859 SORBS3O60504 671 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 HMMRO75330 724 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 LMNAP02545 664 aaKnown RBP16■□□□□ 0.15
VCPKMT-201ENST00000395859 SP100P23497 879 aaPredicted RBP16■□□□□ 0.15
VCPKMT-201ENST00000395859 HSD17B4P51659 736 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 ERVFC1P60507 584 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 VSIG10LQ86VR7 867 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 KIAA2013Q8IYS2 634 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 PDCD2LQ9BRP1 358 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 AGO3Q9H9G7 860 aaKnown RBP16■□□□□ 0.15
VCPKMT-201ENST00000395859 FANCMQ8IYD8 2048 aa16■□□□□ 0.15
VCPKMT-201ENST00000395859 HSPD1P10809 573 aaKnown RBP15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 GNAT1P11488 350 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 HOXB8P17481 243 aaPredicted RBP15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 ZMYM1Q5SVZ6 1142 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 STOX1Q6ZVD7 989 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 NPAS4Q8IUM7 802 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 PANK1Q8TE04 598 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 USP26Q9BXU7 913 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 ZBTB40Q9NUA8 1239 aa15.99■□□□□ 0.15
VCPKMT-201ENST00000395859 TECP42680 631 aa15.98■□□□□ 0.15
VCPKMT-201ENST00000395859 GATMP50440 423 aa15.98■□□□□ 0.15
VCPKMT-201ENST00000395859 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms