RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 POP4O95707 220 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 ZKSCAN1P17029 563 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 LPOP22079 712 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 CCT8P50990 548 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 MRPS5P82675 430 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 PABPC4Q13310 644 aaKnown RBP eCLIP4.7□□□□□ -1.66
HERC4-204ENST00000395198 RASGRF1Q13972 1273 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 SUZ12Q15022 739 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 CORO6Q6QEF8 472 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 LRRC47Q8N1G4 583 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 SEPT1Q8WYJ6 367 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 HDAC2Q92769 488 aaKnown RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 SLC10A4Q96EP9 437 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 EAF1Q96JC9 268 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 TTC25Q96NG3 672 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 CALCOCO1Q9P1Z2 691 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 HDAC6Q9UBN7 1215 aa4.7□□□□□ -1.66
HERC4-204ENST00000395198 C19orf53Q9UNZ5 99 aaPredicted RBP4.7□□□□□ -1.66
HERC4-204ENST00000395198 FMN1Q68DA7 1419 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 H7C1W4 665 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 K7EPI3 171 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NDC80O14777 642 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 POLR3GO15318 223 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 POLR3DP05423 398 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 HDCP19113 662 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 GRK6P43250 576 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SOX9P48436 509 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NFIAQ12857 509 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MEX3BQ6ZN04 569 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 MAMDC2Q7Z304 686 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 NOSTRINQ8IVI9 506 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CNTD1Q8N815 330 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 Q8NFD4 153 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FAM76AQ8TAV0 307 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CCT6BQ92526 530 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SHDQ96IW2 340 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 LRGUKQ96M69 825 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 VCX3BQ9H321 246 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MMADHCQ9H3L0 296 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 KBTBD4Q9NVX7 518 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FAM153AQ9UHL3 310 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CDC23Q9UJX2 597 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 PNMA3Q9UL41 463 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 PPT2Q9UMR5 302 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FHOD3Q2V2M9 1422 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NSD2O96028 1365 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 H7C0S8 307 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FZD9O00144 591 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ZBTB7BO15156 539 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 DOK2O60496 412 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NPPAP01160 153 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FBXO45P0C2W1 286 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TROVE2P10155 538 aaKnown RBP eCLIP4.69□□□□□ -1.66
HERC4-204ENST00000395198 CKMT1AP12532 417 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 RPL13P26373 211 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 CPT1AP50416 773 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 KCNB1Q14721 858 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 RPS26P11Q5JNZ5 115 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 RBM20Q5T481 1227 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 RNF20Q5VTR2 975 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CXorf57Q6NSI4 855 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 MDM1Q8TC05 714 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 VPS50Q96JG6 964 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TCF12Q99081 682 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ISCA1Q9BUE6 129 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NACAP1Q9BZK3 213 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CABP2Q9NPB3 220 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 HELLSQ9NRZ9 838 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 HPF1Q9NWY4 346 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 UBAP1LF5GYI3 381 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SLC22A3O75751 556 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 THEGLP0DJG4 465 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TOP1P11387 765 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 VEGFAP15692 232 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 MX2P20592 715 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SOX6P35712 828 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 GPR85P60893 370 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 PPIDQ08752 370 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 C19orf57Q0VDD7 668 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CDC16Q13042 620 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ABCB5Q2M3G0 1257 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 MEX3CQ5U5Q3 659 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 INTS3Q68E01 1043 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 TMEM132EQ6IEE7 984 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 CCDC81Q6ZN84 652 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 SH3BP5LQ7L8J4 393 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 ZBTB44Q8NCP5 570 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 BBOF1Q8ND07 529 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TEKT4Q8WW24 435 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 TSEN34Q9BSV6 310 aaKnown RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 ACPTQ9BZG2 426 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 FETUBQ9UGM5 382 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 DNM3Q9UQ16 869 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 NUTM2BA6NNL0 878 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 NUTM2EB1AL46 878 aaPredicted RBP4.69□□□□□ -1.66
HERC4-204ENST00000395198 UBXN8O00124 270 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 GPR39O43194 453 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 KDM1AO60341 852 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 HSD3B1P14060 373 aa4.69□□□□□ -1.66
HERC4-204ENST00000395198 HNF4AP41235 474 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms