RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SPOPO43791 374 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 ARHGAP44Q17R89 818 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 USP37Q86T82 979 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 DUSP10Q9Y6W6 482 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 WNT7AO00755 349 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 FOSP01100 380 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 BCRP11274 1271 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 FBXO11Q86XK2 927 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 TPH2Q8IWU9 490 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 ESYT3A0FGR9 886 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 GRID2IPA4D2P6 1211 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 PALM3A6NDB9 673 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 PLEKP08567 350 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 NEFHP12036 1026 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 PPP1R7Q15435 360 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 CEP57Q86XR8 500 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 DHX37Q8IY37 1157 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 PLCB1Q9NQ66 1216 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
UBE2D3-209ENST00000394804 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 SCNN1DP51172 638 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 CUL1Q13616 776 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 IPO4Q8TEX9 1081 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 E9PMD0 336 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 EZRP15311 586 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 CYP2J2P51589 502 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 KCNH2Q12809 1159 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 DENND2CQ68D51 928 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 CACNA2D3Q8IZS8 1091 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 MSL3Q8N5Y2 521 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 TACC3Q9Y6A5 838 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 CAPN6Q9Y6Q1 641 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 VIMP08670 466 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 LMNB1P20700 586 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 NF2P35240 595 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 MEA1Q16626 185 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 NAA35Q5VZE5 725 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 ANO3Q9BYT9 981 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
UBE2D3-209ENST00000394804 ESYT2A0FGR8 921 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 CCDC188H7C350 402 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 TNFRSF25Q93038 417 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 MED15Q96RN5 788 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 DUSP9Q99956 384 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 ABCB11O95342 1321 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 POTEB3A0JP26 581 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 POTECB2RU33 542 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 MEIS1O00470 390 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 ZBTB5O15062 677 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 BBOX1O75936 387 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 CFBP00751 764 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 CERKLQ49MI3 558 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 NAALADL2Q58DX5 795 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 CENPPQ6IPU0 288 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 POTEBQ6S5H4 581 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 FAM178BQ8IXR5 827 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 ICA1Q05084 483 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 FAM186BQ8IYM0 893 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 CCDC77Q9BR77 488 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 RBM12Q9NTZ6 932 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 SMARCAL1Q9NZC9 954 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 PLAAQ9Y263 795 aa12.74□□□□□ -0.37
UBE2D3-209ENST00000394804 PRLRP16471 622 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 GAP43P17677 238 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 GBP2P32456 591 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 IFT88Q13099 833 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 SLC18A3Q16572 532 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 C16orf86Q6ZW13 317 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 FAM53CQ9NYF3 392 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 THSD7AQ9UPZ6 1657 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 CLIC2O15247 247 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 GAS7O60861 476 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 PRPF6O94906 941 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 GKAP1Q5VSY0 366 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 ADAT2Q7Z6V5 191 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 RDH13Q8NBN7 331 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 MXD3Q9BW11 206 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 AP1M1Q9BXS5 423 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 PARP2Q9UGN5 583 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 GFPT2O94808 682 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 PSMC2P35998 433 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 IRAK1P51617 712 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 PPP4CP60510 307 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 IL17AQ16552 155 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 ZNF507Q8TCN5 953 aa12.73□□□□□ -0.37
UBE2D3-209ENST00000394804 MS4A14Q96JA4 679 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms