RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 TMC3Q7Z5M5 1100 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 ZNF384Q8TF68 577 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 SCLT1Q96NL6 688 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 FAM114A2Q9NRY5 505 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 NOVA2Q9UNW9 492 aaKnown RBP24.92■■□□□ 1.58
RARA-202ENST00000394081 CCDC189A1A4V9 331 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 ADAMTS2O95450 1211 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 TECP42680 631 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 FXR2P51116 673 aaKnown RBP eCLIP24.92■■□□□ 1.58
RARA-202ENST00000394081 PARP10Q53GL7 1025 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 ERMARDQ5T6L9 678 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 OR2W6PQ8NHA6 318 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 CCDC26Q8TAB7 109 aa24.92■■□□□ 1.58
RARA-202ENST00000394081 BZW2Q9Y6E2 419 aaKnown RBP24.92■■□□□ 1.58
RARA-202ENST00000394081 CCDC88AQ3V6T2 1871 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 GNA11P29992 359 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 DNA2P51530 1060 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 POLR2FP61218 127 aaKnown RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 ATP2B2Q01814 1243 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 ITIH4Q14624 930 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 LETM2Q2VYF4 491 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 MSL1Q68DK7 614 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 RASGEF1CQ8N431 466 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 ANKS4BQ8N8V4 417 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 MAB21L3Q8N8X9 362 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 LRRC57Q8N9N7 239 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 CCHCR1Q8TD31 782 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 UBLCP1Q8WVY7 318 aaPredicted RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 LSM14BQ9BX40 385 aaKnown RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 PACSIN2Q9UNF0 486 aaPredicted RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 CCT8L1PA6NM43 557 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 TRIM37O94972 964 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 ZBTB48P10074 688 aaPredicted RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 MAGOHP61326 146 aaKnown RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 ELF3P78545 371 aaPredicted RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 CAVIN4Q5BKX8 364 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 CCDC197Q8NCU1 140 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 MAGOHBQ96A72 148 aaKnown RBP24.91■■□□□ 1.58
RARA-202ENST00000394081 FAM129AQ9BZQ8 928 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 ITGB4P16144 1822 aa24.91■■□□□ 1.58
RARA-202ENST00000394081 ASAP2O43150 1006 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 ZPR1O75312 459 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 SATB1Q01826 763 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 ASIC2Q16515 512 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 MYOCDQ8IZQ8 938 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 NSUN4Q96CB9 384 aaKnown RBP24.9■■□□□ 1.58
RARA-202ENST00000394081 XPO6Q96QU8 1125 aaKnown RBP24.9■■□□□ 1.58
RARA-202ENST00000394081 C6orf50Q9HD87 102 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 BATF3Q9NR55 127 aa24.9■■□□□ 1.58
RARA-202ENST00000394081 F8VZ95 297 aa24.89■■□□□ 1.58
RARA-202ENST00000394081 ATP6V1G2O95670 118 aa24.89■■□□□ 1.58
RARA-202ENST00000394081 SLMAPQ14BN4 828 aa24.89■■□□□ 1.58
RARA-202ENST00000394081 HOOK3Q86VS8 718 aa24.89■■□□□ 1.58
RARA-202ENST00000394081 SPZ1Q9BXG8 430 aa24.89■■□□□ 1.58
RARA-202ENST00000394081 BCCIPQ9P287 314 aaKnown RBP eCLIP24.89■■□□□ 1.58
RARA-202ENST00000394081 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.89■■□□□ 1.58
RARA-202ENST00000394081 PALM3A6NDB9 673 aaPredicted RBP24.89■■□□□ 1.57
RARA-202ENST00000394081 CFAP73A6NFT4 308 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 CYTH3O43739 400 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 CEP104O60308 925 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 CLNS1AP54105 237 aaKnown RBP24.89■■□□□ 1.57
RARA-202ENST00000394081 SLC35G1Q2M3R5 365 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 LMBR1Q8WVP7 490 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 RAD54LQ92698 747 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 CUL5Q93034 780 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 PNMA5Q96PV4 448 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.89■■□□□ 1.57
RARA-202ENST00000394081 RAB34Q9BZG1 259 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 NEUROG2Q9H2A3 272 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 ADAMTS1Q9UHI8 967 aa24.89■■□□□ 1.57
RARA-202ENST00000394081 GYG1P46976 350 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 RNASE9P60153 205 aaKnown RBP24.88■■□□□ 1.57
RARA-202ENST00000394081 KRT71Q3SY84 523 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 TRIM59Q8IWR1 403 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 FAXDC2Q96IV6 333 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 RSRC1Q96IZ7 334 aaKnown RBP24.88■■□□□ 1.57
RARA-202ENST00000394081 CDK5RAP3Q96JB5 506 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 IL17RBQ9NRM6 502 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 SLC12A4Q9UP95 1085 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 NOC2LQ9Y3T9 749 aaKnown RBP24.88■■□□□ 1.57
RARA-202ENST00000394081 MYH7BA7E2Y1 1941 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 F8W031 263 aaPredicted RBP24.88■■□□□ 1.57
RARA-202ENST00000394081 RTN2O75298 545 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 PPFIA2O75334 1257 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 RAPGEF1Q13905 1077 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 PDIA5Q14554 519 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 TMEM266Q2M3C6 531 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 SLC4A9Q96Q91 983 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 MTMR9Q96QG7 549 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 EBF2Q9HAK2 575 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 NOD2Q9HC29 1040 aa24.88■■□□□ 1.57
RARA-202ENST00000394081 PPP1R12AO14974 1030 aaPredicted RBP24.87■■□□□ 1.57
RARA-202ENST00000394081 SSBP05455 408 aaKnown RBP eCLIP24.87■■□□□ 1.57
RARA-202ENST00000394081 TFAP4Q01664 338 aa24.87■■□□□ 1.57
RARA-202ENST00000394081 PPP2R5EQ16537 467 aa24.87■■□□□ 1.57
RARA-202ENST00000394081 ZNF317Q96PQ6 595 aaPredicted RBP24.87■■□□□ 1.57
RARA-202ENST00000394081 PACSIN1Q9BY11 444 aa24.87■■□□□ 1.57
RARA-202ENST00000394081 GANQ9H2C0 597 aa24.87■■□□□ 1.57
RARA-202ENST00000394081 SUCLA2Q9P2R7 463 aaPredicted RBP24.87■■□□□ 1.57
RARA-202ENST00000394081 TTC7AQ9ULT0 858 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms