RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 CACNA1HO95180 2353 aa22.99■■□□□ 1.27
POLR2J-202ENST00000393794 ZDBF2Q9HCK1 2354 aa22.99■■□□□ 1.27
POLR2J-202ENST00000393794 CYTH3O43739 400 aa22.98■■□□□ 1.27
POLR2J-202ENST00000393794 STAM2O75886 525 aa22.98■■□□□ 1.27
POLR2J-202ENST00000393794 MGAT3Q09327 533 aa22.98■■□□□ 1.27
POLR2J-202ENST00000393794 NEDD9Q14511 834 aa22.98■■□□□ 1.27
POLR2J-202ENST00000393794 IFIT1BQ5T764 474 aaKnown RBP22.98■■□□□ 1.27
POLR2J-202ENST00000393794 LMBR1Q8WVP7 490 aa22.98■■□□□ 1.27
POLR2J-202ENST00000393794 C11orf84Q9BUA3 381 aaPredicted RBP22.98■■□□□ 1.27
POLR2J-202ENST00000393794 CWC27Q6UX04 472 aaKnown RBP22.97■■□□□ 1.27
POLR2J-202ENST00000393794 CYFIP1Q7L576 1253 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 BMP8AQ7Z5Y6 402 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 PLEKHM2Q8IWE5 1019 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 SMC5Q8IY18 1101 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 PIGSQ96S52 555 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 SENP7Q9BQF6 1050 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 LNPKQ9C0E8 428 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 CNNM2Q9H8M5 875 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 RWDD3Q9Y3V2 267 aa22.97■■□□□ 1.27
POLR2J-202ENST00000393794 ENPP3O14638 875 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 TBX10O75333 385 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 CTNNB1P35222 781 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 TRAF1Q13077 416 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 ADAM15Q13444 863 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 IMMTQ16891 758 aaKnown RBP22.96■■□□□ 1.27
POLR2J-202ENST00000393794 CYB5R4Q7L1T6 521 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 FCHSD1Q86WN1 690 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 TRIM50Q86XT4 487 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 MSLNLQ96KJ4 702 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 UBAC1Q9BSL1 405 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 ADGRA3Q8IWK6 1321 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 NRCAMQ92823 1304 aa22.96■■□□□ 1.27
POLR2J-202ENST00000393794 NOP56O00567 594 aaKnown RBP22.95■■□□□ 1.26
POLR2J-202ENST00000393794 EYA4O95677 639 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 MMP1P03956 469 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 GTF2F1P35269 517 aaKnown RBP eCLIP22.95■■□□□ 1.26
POLR2J-202ENST00000393794 SMAD4Q13485 552 aaKnown RBP22.95■■□□□ 1.26
POLR2J-202ENST00000393794 LPIN1Q14693 890 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 GRM4Q14833 912 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 GNPTABQ3T906 1256 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 RNF135Q8IUD6 432 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 MFSD14AQ96MC6 490 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 POP1Q99575 1024 aaKnown RBP22.95■■□□□ 1.26
POLR2J-202ENST00000393794 PLVAPQ9BX97 442 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 MUTYHQ9UIF7 546 aa22.95■■□□□ 1.26
POLR2J-202ENST00000393794 PNMA6FA0A0J9YX94 578 aa22.94■■□□□ 1.26
POLR2J-202ENST00000393794 FIBPO43427 364 aa22.94■■□□□ 1.26
POLR2J-202ENST00000393794 EP400NLQ6ZTU2 488 aa22.94■■□□□ 1.26
POLR2J-202ENST00000393794 EDAQ92838 391 aa22.94■■□□□ 1.26
POLR2J-202ENST00000393794 PLAGL2Q9UPG8 496 aa22.94■■□□□ 1.26
POLR2J-202ENST00000393794 SUPT16HQ9Y5B9 1047 aaKnown RBP22.94■■□□□ 1.26
POLR2J-202ENST00000393794 MBLAC1A4D2B0 266 aaPredicted RBP22.93■■□□□ 1.26
POLR2J-202ENST00000393794 DGKIO75912 1065 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 RRP1P56182 461 aaKnown RBP22.93■■□□□ 1.26
POLR2J-202ENST00000393794 ARHGAP4P98171 946 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 TROAPQ12815 778 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 TAF2Q6P1X5 1199 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 RUFY4Q6ZNE9 571 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 P2RX5Q93086 422 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 IL25Q9H293 177 aa22.93■■□□□ 1.26
POLR2J-202ENST00000393794 ZNF215Q9UL58 517 aaPredicted RBP22.93■■□□□ 1.26
POLR2J-202ENST00000393794 LINC01565O15544 149 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 GHRP10912 638 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 CLUL1Q15846 466 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 HOMER1Q86YM7 354 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 LINC01599Q8WXQ3 324 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 CD207Q9UJ71 328 aa22.92■■□□□ 1.26
POLR2J-202ENST00000393794 CFAP54Q96N23 3096 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 DNAJB1P25685 340 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 CBX2Q14781 532 aaPredicted RBP22.91■■□□□ 1.26
POLR2J-202ENST00000393794 NAALADL2Q58DX5 795 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 FBXO47Q5MNV8 452 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 MARCH8Q5T0T0 291 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 XRRA1Q6P2D8 792 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 RTN4RL1Q86UN2 441 aaPredicted RBP22.91■■□□□ 1.26
POLR2J-202ENST00000393794 SENP2Q9HC62 589 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 ALG13Q9NP73 1137 aaKnown RBP22.91■■□□□ 1.26
POLR2J-202ENST00000393794 RTEL1Q9NZ71 1219 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 CLEC1BQ9P126 229 aa22.91■■□□□ 1.26
POLR2J-202ENST00000393794 KIAA1671Q9BY89 1806 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 LOC730098B7Z3J9 87 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 HIP1O00291 1037 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 PCNX4Q63HM2 1172 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 PRSS33Q8NF86 280 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 SPPL3Q8TCT6 385 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 PHOX2BQ99453 314 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 DIAPH3Q9NSV4 1193 aa22.9■■□□□ 1.26
POLR2J-202ENST00000393794 STXBP3O00186 592 aa22.89■■□□□ 1.25
POLR2J-202ENST00000393794 PIK3CDO00329 1044 aa22.89■■□□□ 1.25
POLR2J-202ENST00000393794 MEIS2O14770 477 aa22.89■■□□□ 1.25
POLR2J-202ENST00000393794 COASYQ13057 564 aa22.89■■□□□ 1.25
POLR2J-202ENST00000393794 BTG3Q14201 252 aaPredicted RBP22.89■■□□□ 1.25
POLR2J-202ENST00000393794 UTP14CQ5TAP6 766 aaKnown RBP22.89■■□□□ 1.25
POLR2J-202ENST00000393794 AGO3Q9H9G7 860 aaKnown RBP22.89■■□□□ 1.25
POLR2J-202ENST00000393794 GSTTP1A0A1W2PQM5 241 aa22.88■■□□□ 1.25
POLR2J-202ENST00000393794 ATP9AO75110 1047 aa22.88■■□□□ 1.25
POLR2J-202ENST00000393794 ITGB1P05556 798 aa22.88■■□□□ 1.25
POLR2J-202ENST00000393794 KCNA2P16389 499 aa22.88■■□□□ 1.25
POLR2J-202ENST00000393794 TSHZ1Q6ZSZ6 1077 aa22.88■■□□□ 1.25
POLR2J-202ENST00000393794 CHD1LQ86WJ1 897 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms