RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TRIM9Q9C026 710 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NDST4Q9H3R1 872 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 EPB41L5Q9HCM4 733 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NFU1Q9UMS0 254 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NKRFO15226 690 aaKnown RBP eCLIP11.95□□□□□ -0.5
BRF1-204ENST00000392557 CORO7P57737 925 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 SF3A3Q12874 501 aaKnown RBP eCLIP11.95□□□□□ -0.52e-6■■■■■ 42.3
BRF1-204ENST00000392557 ABCB5Q2M3G0 1257 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 ICE2Q659A1 982 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 STYK1Q6J9G0 422 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 TADA2BQ86TJ2 420 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
BRF1-204ENST00000392557 EFCC1Q9HA90 598 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 TMOD2Q9NZR1 351 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 PCDHA1Q9Y5I3 950 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
BRF1-204ENST00000392557 PNMA6FA0A0J9YX94 578 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TARSL2A2RTX5 802 aaKnown RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 ATP2C2O75185 946 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 RHOBTB3O94955 611 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 OTUD6BQ8N6M0 293 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TAF4BQ92750 862 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TSG101Q99816 390 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 EHHADHQ08426 723 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TMEM266Q2M3C6 531 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 RETREG2Q8NC44 543 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 ZNF507Q8TCN5 953 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 CUL5Q93034 780 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 ARL8AQ96BM9 186 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 STIM2Q9P246 746 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 ANO9A1A5B4 782 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 YDJCA8MPS7 323 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TMCO5BA8MYB1 307 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 TCP1P17987 556 aaKnown RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 IRX3P78415 501 aaPredicted RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 QRICH1Q2TAL8 776 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 GPATCH4Q5T3I0 446 aaKnown RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 MIGA2Q7L4E1 593 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 KRT12Q99456 494 aa11.94□□□□□ -0.5
BRF1-204ENST00000392557 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.94□□□□□ -0.5
BRF1-204ENST00000392557 ZSCAN5CA6NGD5 496 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 ZBTB5O15062 677 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 EPHB6O15197 1021 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 HEXIM1O94992 359 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 MRPL12P52815 198 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 NNTQ13423 1086 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 KCNB1Q14721 858 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 CFAP221Q4G0U5 840 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 VWA3BQ502W6 1294 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 RBM26Q5T8P6 1007 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 FBXW10Q5XX13 1052 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 SNX29Q8TEQ0 813 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 LRRC15Q8TF66 581 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 CCDC17Q96LX7 622 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 DHX36Q9H2U1 1008 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 LUC7LQ9NQ29 371 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 RBM12Q9NTZ6 932 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 ARHGAP20Q9P2F6 1191 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 CAPN7Q9Y6W3 813 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 SLX4Q8IY92 1834 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 A0A087WUV0 522 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 EPHB4P54760 987 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 CACNB1Q02641 598 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 CDC37Q16543 378 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 CCDC84Q86UT8 332 aaPredicted RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 OGFOD1Q8N543 542 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 GOLGA8KD6RF30 607 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 F5H6K3 240 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 KLRC4O43908 158 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 PRPF6O94906 941 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 FECHP22830 423 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
BRF1-204ENST00000392557 POLR2FP61218 127 aaKnown RBP11.93□□□□□ -0.5
BRF1-204ENST00000392557 KLRC3Q07444 240 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 IFT20Q8IY31 132 aa11.93□□□□□ -0.5
BRF1-204ENST00000392557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.93□□□□□ -0.5
BRF1-204ENST00000392557 IGKV6D-41A0A0C4DH26 115 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 ZNF263O14978 683 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 TTLL6Q8N841 843 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 SH2D4AQ9H788 454 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 PPANQ9NQ55 473 aaKnown RBP11.92□□□□□ -0.5
BRF1-204ENST00000392557 KBTBD4Q9NVX7 518 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
BRF1-204ENST00000392557 AGPSO00116 658 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 LAD1O00515 517 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 GUCY1A3Q02108 690 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 DLGAP5Q15398 846 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 SLC9C1Q4G0N8 1177 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 KRT79Q5XKE5 535 aa11.92□□□□□ -0.5
BRF1-204ENST00000392557 BMP2KQ9NSY1 1161 aaPredicted RBP11.92□□□□□ -0.5
BRF1-204ENST00000392557 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
BRF1-204ENST00000392557 CARSP49589 748 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms