RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 NEK8Q86SG6 692 aa12.71□□□□□ -0.37
CCDC57-205ENST00000392346 KLHL7Q8IXQ5 586 aa12.71□□□□□ -0.37
CCDC57-205ENST00000392346 SNX29Q8TEQ0 813 aa12.71□□□□□ -0.37
CCDC57-205ENST00000392346 PAIP2Q9BPZ3 127 aaKnown RBP12.71□□□□□ -0.37
CCDC57-205ENST00000392346 TLR10Q9BXR5 811 aa12.71□□□□□ -0.37
CCDC57-205ENST00000392346 DLEC1Q9Y238 1755 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 TLR2O60603 784 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 ECM2O94769 699 aaPredicted RBP12.71□□□□□ -0.38
CCDC57-205ENST00000392346 STAT3P40763 770 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 BTDP43251 543 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 POLR2FP61218 127 aaKnown RBP12.71□□□□□ -0.38
CCDC57-205ENST00000392346 KCNMA1Q12791 1236 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 SF3B3Q15393 1217 aaKnown RBP12.71□□□□□ -0.38
CCDC57-205ENST00000392346 DDX42Q86XP3 938 aaKnown RBP eCLIP12.71□□□□□ -0.38
CCDC57-205ENST00000392346 FAM76AQ8TAV0 307 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 BCAS4Q8TDM0 211 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 AENQ8WTP8 325 aaKnown RBP12.71□□□□□ -0.38
CCDC57-205ENST00000392346 DDX12PQ92771 950 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 KAT2BQ92831 832 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 NLRP3Q96P20 1036 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 HYOU1Q9Y4L1 999 aa12.71□□□□□ -0.38
CCDC57-205ENST00000392346 E9PMD0 336 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 CDK8P49336 464 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 CHADLQ6NUI6 762 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 CXorf56Q9H5V9 222 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 LRRC4CQ9HCJ2 640 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 MED4Q9NPJ6 270 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 ZNF652Q9Y2D9 606 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 PALM3A6NDB9 673 aaPredicted RBP12.7□□□□□ -0.38
CCDC57-205ENST00000392346 COQ9O75208 318 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 PALMO75781 387 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 KLRC1P26715 233 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 ABL2P42684 1182 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 GUCY2DQ02846 1103 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 ARL10Q8N8L6 244 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 FAM133AQ8N9E0 248 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 CDK5RAP3Q96JB5 506 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 ZIM3Q96PE6 472 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 IRF2BPLQ9H1B7 796 aa12.7□□□□□ -0.38
CCDC57-205ENST00000392346 TACC1O75410 805 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 IRAK1P51617 712 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 EHHADHQ08426 723 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 RAPGEF1Q13905 1077 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 CALCRLQ16602 461 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 KLHDC7AQ5VTJ3 777 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 CCDC70Q6NSX1 233 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 BAP1Q92560 729 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 LARP4BQ92615 738 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 DHTKD1Q96HY7 919 aaPredicted RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 CCDC43Q96MW1 224 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 PURBQ96QR8 312 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 KRT12Q99456 494 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 EPB41L5Q9HCM4 733 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 ADAMTS1Q9UHI8 967 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 GRIN2DO15399 1336 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 TRAF5O00463 557 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 CKAP4Q07065 602 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 C8orf74Q6P047 294 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 REXO1Q8N1G1 1221 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 PHC3Q8NDX5 983 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 TBC1D5Q92609 795 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 TAF4BQ92750 862 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 SETDB2Q96T68 719 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 LSM14BQ9BX40 385 aaKnown RBP12.69□□□□□ -0.38
CCDC57-205ENST00000392346 PLAGL2Q9UPG8 496 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 SNED1Q8TER0 1413 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 LAMB1P07942 1786 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 MEIS1O00470 390 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 CAND2O75155 1236 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 IVLP07476 585 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 SEC24CP53992 1094 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 SV2BQ7L1I2 683 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 ZMYND12Q9H0C1 365 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 ACBD3Q9H3P7 528 aa12.69□□□□□ -0.38
CCDC57-205ENST00000392346 HPDP32754 393 aaPredicted RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 CCDC40Q4G0X9 1142 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 GJB7Q6PEY0 223 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 TEX11Q8IYF3 940 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 CALML4Q96GE6 196 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 SEC63Q9UGP8 760 aaKnown RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 FAM184BQ9ULE4 1060 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 A0A087X0T9 212 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 PPP1R11O60927 126 aaPredicted RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 HEXIM1O94992 359 aaKnown RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 FAM228BP0C875 321 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 CASP5P51878 434 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 HGSNATQ68CP4 663 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 ERGIC2Q96RQ1 377 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 AP1M1Q9BXS5 423 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 PIM2Q9P1W9 311 aa12.68□□□□□ -0.38
CCDC57-205ENST00000392346 G3BP2Q9UN86 482 aaKnown RBP12.68□□□□□ -0.38
CCDC57-205ENST00000392346 JRKLQ9Y4A0 524 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms