RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 BORAQ6PGQ7 559 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 POMZP3Q6PJE2 187 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 Q6ZUG5 572 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 NOL8Q76FK4 1167 aaKnown RBP3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 MCF2L2Q86YR7 1114 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 FAM178BQ8IXR5 827 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 PALM2Q8IXS6 379 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPIL6Q8IXY8 311 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 PIP4K2CQ8TBX8 421 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 TMEM169Q96HH4 297 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 TGIF2Q9GZN2 237 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 TMEM168Q9H0V1 697 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 VPS11Q9H270 941 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 SMOC1Q9H4F8 434 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 KANSL2Q9H9L4 492 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 SLC6A20Q9NP91 592 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 PCDHB4Q9Y5E5 795 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 MRPL42Q9Y6G3 142 aaKnown RBP3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 SLC4A7Q9Y6M7 1214 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 ARID4BQ4LE39 1312 aaPredicted RBP3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 ASXL2Q76L83 1435 aa3.09□□□□□ -1.92
SNORA40.19-201ENST00000390846 NPEPPSL1A6NEC2 478 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 SLC27A2O14975 620 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 MEFVO15553 781 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 NARSO43776 548 aaKnown RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 CKMP06732 381 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 SNRPB2P08579 225 aaKnown RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZNF888P0CJ79 500 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 DNAJA1P31689 397 aaKnown RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 HMGA2P52926 109 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 DGCR2P98153 550 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 GRIN1Q05586 938 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 KCNAB2Q13303 367 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 PTPROQ16827 1216 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 SLC10A6Q3KNW5 377 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 CRB2Q5IJ48 1285 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 AGBL4Q5VU57 503 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 PRAMEF18Q5VWM3 479 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZC3H18Q86VM9 953 aaKnown RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 CIR1Q86X95 450 aaPredicted RBP3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 CFHR4Q92496 578 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 OSBP2Q969R2 916 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 SLITRK6Q9H5Y7 841 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZSWIM4Q9H7M6 989 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 MYOTQ9UBF9 498 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 SRRDQ9UH36 339 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 CROTQ9UKG9 612 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 RIPOR2Q9Y4F9 1068 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 MRVI1Q9Y6F6 885 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 ZNF536O15090 1300 aa3.08□□□□□ -1.92
SNORA40.19-201ENST00000390846 PCSK5Q92824 1860 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 GJB6O95452 261 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 FGRP09769 529 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 FAHP16930 419 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 NCLP19338 710 aaKnown RBP3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 ATP2B1P20020 1258 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 SELENOPP49908 381 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 PPP2R2AP63151 447 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 IRX6P78412 446 aaPredicted RBP3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 FOXE3Q13461 319 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 BMS1Q14692 1282 aaKnown RBP3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 SURF1Q15526 300 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 CD276Q5ZPR3 534 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 CYP4F22Q6NT55 531 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 KCNT2Q6UVM3 1135 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 OTOP3Q7RTS5 596 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 CELF2-AS1Q8N7Q2 184 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 CHST13Q8NET6 341 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 UHMK1Q8TAS1 419 aaKnown RBP3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 EVI5LQ96CN4 794 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 ANAPC16Q96DE5 110 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 TMEM209Q96SK2 561 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 EPB41L1Q9H4G0 881 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 SEC61A2Q9H9S3 476 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 NGRNQ9NPE2 291 aaKnown RBP3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 CLDND1Q9NY35 253 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 HS3ST3A1Q9Y663 406 aa3.07□□□□□ -1.92
SNORA40.19-201ENST00000390846 NOP56O00567 594 aaKnown RBP3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 FZD7O75084 574 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 CPP00450 1065 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 COL6A2P12110 1019 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 KRT4P19013 534 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 GTF2A2P52657 109 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 COL10A1Q03692 680 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 MAP4K2Q12851 820 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 HNRNPA0Q13151 305 aaKnown RBP3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 NOLC1Q14978 699 aaKnown RBP eCLIP3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 RNF151Q2KHN1 245 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 MAMDC4Q6UXC1 1216 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 RNF207Q6ZRF8 634 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 ARHGEF18Q6ZSZ5 1173 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 GPR155Q7Z3F1 870 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 FUKQ8N0W3 1084 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 STPG3Q8N7X2 389 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 PHOSPHO1Q8TCT1 267 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 UBE2Q2Q8WVN8 375 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 EDAQ92838 391 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 EXTL1Q92935 676 aa3.06□□□□□ -1.92
SNORA40.19-201ENST00000390846 KISS1RQ969F8 398 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms