RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 CYP26C1Q6V0L0 522 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 SCFD1Q8WVM8 642 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 ERGIC2Q96RQ1 377 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 MXRA8Q9BRK3 442 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 AS3MTQ9HBK9 375 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 HOMER2Q9NSB8 354 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 FZD1Q9UP38 647 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 COL11A1P12107 1806 aaPredicted RBP20.17■□□□□ 0.82
ACTN4-202ENST00000390009 SLITRK3O94933 977 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 KIF20AO95235 890 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 PTPRAP18433 802 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
ACTN4-202ENST00000390009 FKBP3Q00688 224 aaKnown RBP20.17■□□□□ 0.82
ACTN4-202ENST00000390009 MAN2A1Q16706 1144 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 VWA3BQ502W6 1294 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 MUM1L1Q5H9M0 696 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 NELFCDQ8IXH7 590 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 OR8K1Q8NGG5 319 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 DYDC2Q96IM9 177 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 NUP58Q9BVL2 599 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 WDR11Q9BZH6 1224 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 TTYH3Q9C0H2 523 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 MRPL44Q9H9J2 332 aaKnown RBP20.17■□□□□ 0.82
ACTN4-202ENST00000390009 PICK1Q9NRD5 415 aa20.17■□□□□ 0.82
ACTN4-202ENST00000390009 SBF1O95248 1867 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 RLFQ13129 1914 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 TRIM21P19474 475 aaKnown RBP20.16■□□□□ 0.82
ACTN4-202ENST00000390009 KLK7P49862 253 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 TPH2Q8IWU9 490 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 RETREG2Q8NC44 543 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 ZNF280CQ8ND82 737 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 DNAJC7Q99615 494 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 NDST4Q9H3R1 872 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 GGA3Q9NZ52 723 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
ACTN4-202ENST00000390009 LOXHD1Q8IVV2 1947 aa20.16■□□□□ 0.82
ACTN4-202ENST00000390009 RASSF10A6NK89 507 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 IPO5O00410 1097 aaKnown RBP20.15■□□□□ 0.82
ACTN4-202ENST00000390009 TRAF5O00463 557 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 ITGB5P18084 799 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 GPC2Q8N158 579 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 PIGOQ8TEQ8 1089 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 RUSC1Q9BVN2 902 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 TEKT3Q9BXF9 490 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 KCTD10Q9H3F6 313 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 UNC45AQ9H3U1 944 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 ZBED4O75132 1171 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 ARHGAP27Q6ZUM4 889 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 SFR1Q86XK3 245 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 IL31RAQ8NI17 732 aa20.15■□□□□ 0.82
ACTN4-202ENST00000390009 PCMTD1Q96MG8 357 aaPredicted RBP20.15■□□□□ 0.82
ACTN4-202ENST00000390009 MAP3K20Q9NYL2 800 aaKnown RBP20.15■□□□□ 0.82
ACTN4-202ENST00000390009 FANCGO15287 622 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 BCRP11274 1271 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 LMNB1P20700 586 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 B3GNT9Q6UX72 402 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 SYTL5Q8TDW5 730 aaPredicted RBP20.14■□□□□ 0.81
ACTN4-202ENST00000390009 RIT2Q99578 217 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 L2HGDHQ9H9P8 463 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 AGPAT5Q9NUQ2 364 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 COL4A3BPQ9Y5P4 624 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 VWA5AO00534 786 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 FDX1P10109 184 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 MUTP22033 750 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 EPS15P42566 896 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 CASP5P51878 434 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 FIGNQ5HY92 759 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 RINT1Q6NUQ1 792 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 CEP63Q96MT8 703 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 CHP1Q99653 195 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 KCNH7Q9NS40 1196 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 PNMA2Q9UL42 364 aa20.14■□□□□ 0.81
ACTN4-202ENST00000390009 RSPH10B2B2RC85 870 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 RSPH10BP0C881 870 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 HIRAP54198 1017 aaPredicted RBP20.13■□□□□ 0.81
ACTN4-202ENST00000390009 GNG11P61952 73 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 RPS6P62753 249 aaKnown RBP20.13■□□□□ 0.81
ACTN4-202ENST00000390009 EPHA7Q15375 998 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 TSR1Q2NL82 804 aaKnown RBP20.13■□□□□ 0.81
ACTN4-202ENST00000390009 PCNX4Q63HM2 1172 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 NIPA1Q7RTP0 329 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.813e-26■■■■■ 28.8
ACTN4-202ENST00000390009 WNK4Q96J92 1243 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 ZHX2Q9Y6X8 837 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 FRMPD4Q14CM0 1322 aa20.13■□□□□ 0.81
ACTN4-202ENST00000390009 TBCAO75347 108 aaKnown RBP20.12■□□□□ 0.81
ACTN4-202ENST00000390009 ERCC3P19447 782 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 ACRBPQ8NEB7 543 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 KLRG1Q96E93 195 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 TRERF1Q96PN7 1200 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 LZTFL1Q9NQ48 299 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 PPP2R3BQ9Y5P8 575 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 SSC5DA1L4H1 1573 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 MYH11P35749 1972 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 HMGCS2P54868 508 aa20.12■□□□□ 0.81
ACTN4-202ENST00000390009 ZBED6P86452 979 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms