RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
SOD1-202ENST00000389995 GFRA3O60609 400 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 KDM4AO75164 1064 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 RB1P06400 928 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 GHRP10912 638 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 ZXDAP98168 799 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 ARHGAP4P98171 946 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 RUFY4Q6ZNE9 571 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 RBM23Q86U06 439 aaKnown RBP13.73□□□□□ -0.21
SOD1-202ENST00000389995 FCHSD1Q86WN1 690 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 SUGP1Q8IWZ8 645 aaKnown RBP13.73□□□□□ -0.21
SOD1-202ENST00000389995 STAG2Q8N3U4 1231 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 ESR2Q92731 530 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 EVI5LQ96CN4 794 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 MSLNLQ96KJ4 702 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 LMAN2LQ9H0V9 348 aa13.73□□□□□ -0.21
SOD1-202ENST00000389995 RC3H2Q9HBD1 1191 aaKnown RBP13.73□□□□□ -0.21
SOD1-202ENST00000389995 CCDC171Q6TFL3 1326 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 MMP1P03956 469 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 RRP1P56182 461 aaKnown RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 RBM10P98175 930 aaKnown RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 SP4Q02446 784 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 BTG3Q14201 252 aaPredicted RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 ASPRV1Q53RT3 343 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 UTP14CQ5TAP6 766 aaKnown RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 DGKHQ86XP1 1220 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 FBXL6Q8N531 539 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 ENAHQ8N8S7 591 aaPredicted RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 APBB2Q92870 758 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 BARX2Q9UMQ3 279 aaPredicted RBP13.72□□□□□ -0.21
SOD1-202ENST00000389995 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 EVPLQ92817 2033 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 DMXL1Q9Y485 3027 aa13.72□□□□□ -0.21
SOD1-202ENST00000389995 FRYLO94915 3013 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 TRIM6-TRIM34B2RNG4 842 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 B4E1Z4 1266 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 LOC730098B7Z3J9 87 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
SOD1-202ENST00000389995 ENPP3O14638 875 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 GLP2RO95838 553 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 NRIP1P48552 1158 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 LPIN1Q14693 890 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 FAM26DQ5JW98 314 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 KCNV1Q6PIU1 500 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 CLP1Q92989 425 aaKnown RBP13.71□□□□□ -0.21
SOD1-202ENST00000389995 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 MAF1Q9H063 256 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
SOD1-202ENST00000389995 CACNA1AO00555 2505 aa13.71□□□□□ -0.21
SOD1-202ENST00000389995 ZMYM6O95789 1325 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 CAND2O75155 1236 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 EYA4O95677 639 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 ITGB1P05556 798 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 CCND2P30279 289 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 ADAM17P78536 824 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 PAN2Q504Q3 1202 aaKnown RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 SMRP1Q8NCR6 262 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 SPPL3Q8TCT6 385 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 LINC01599Q8WXQ3 324 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 ZNF689Q96CS4 500 aaPredicted RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 ZBTB10Q96DT7 871 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 GPR20Q99678 358 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 RNF41Q9H4P4 317 aaPredicted RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 USP15Q9Y4E8 981 aaPredicted RBP13.7□□□□□ -0.22
SOD1-202ENST00000389995 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
SOD1-202ENST00000389995 ZNF292O60281 2723 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 H0Y858 1186 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 ZNF213O14771 459 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 PPFIA3O75145 1194 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 DGKIO75912 1065 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 PDGFBP01127 241 aaPredicted RBP13.69□□□□□ -0.22
SOD1-202ENST00000389995 TGFB3P10600 412 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 GNAT1P11488 350 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 PCP11498 1178 aaKnown RBP13.69□□□□□ -0.22
SOD1-202ENST00000389995 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
SOD1-202ENST00000389995 GATMP50440 423 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
SOD1-202ENST00000389995 GHRHRQ02643 423 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 SLC35G1Q2M3R5 365 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 ANKRD45Q5TZF3 282 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 IQCA1Q86XH1 822 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 EFHBQ8N7U6 833 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 KLHL23Q8NBE8 558 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 ASIC4Q96FT7 647 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 EHMT1Q9H9B1 1298 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 TLR9Q9NR96 1032 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 ZSWIM5Q9P217 1185 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms