RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 SART1O43290 800 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 RHOBTB3O94955 611 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 RASSF2P50749 326 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TAF11Q15544 211 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 CYP4F22Q6NT55 531 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 DCP1AQ9NPI6 582 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 TMEM260Q9NX78 707 aa14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-201ENST00000389328 POC1B-GALNT4F8VUJ3 575 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 PSMD2Q13200 908 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 AP1ARQ63HQ0 302 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 FAM186BQ8IYM0 893 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 TCHPQ9BT92 498 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 GLT8D2Q9H1C3 349 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 PCDHA1Q9Y5I3 950 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 PDS5AQ29RF7 1337 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 A0A087X0B3 334 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 RAD51CO43502 376 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 DESP17661 470 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 CRKLP46109 303 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 HSPA2P54652 639 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 LRRC14Q15048 493 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 ZNF622Q969S3 477 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 CHMP6Q96FZ7 201 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 NOC2LQ9Y3T9 749 aaKnown RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 CCDC62Q6P9F0 684 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 TAB3Q8N5C8 712 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 GIMAP8Q8ND71 665 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 AZI2Q9H6S1 392 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 ZNF804BA4D1E1 1349 aa14.28□□□□□ -0.12
TRAPPC9-201ENST00000389328 SMIM24O75264 130 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 GUF1Q8N442 669 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 CCDC127Q96BQ5 260 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 CYFIP2Q96F07 1278 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 DNAJC7Q99615 494 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 TMEM47Q9BQJ4 181 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 SH3GLB2Q9NR46 395 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 NOP53Q9NZM5 478 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 WDR17Q8IZU2 1322 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 E9PMD0 336 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 TULP2O00295 520 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 PTGISQ16647 500 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 EARS2Q5JPH6 523 aaKnown RBP14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 C10orf76Q5T2E6 689 aa14.27□□□□□ -0.12
TRAPPC9-201ENST00000389328 PLEKHG2Q9H7P9 1386 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 ELF1P32519 619 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 NBPF9Q3BBW0 867 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 ERFEQ4G0M1 354 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 PPP4R3AQ6IN85 833 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 MARCH10Q8NA82 808 aaPredicted RBP14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.27□□□□□ -0.137e-6■■□□□ 12.2
TRAPPC9-201ENST00000389328 FAM167BQ9BTA0 163 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 SFI1A8K8P3 1242 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 ATF2P15336 505 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 ATP2A2P16615 1042 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 TRIM28Q13263 835 aaKnown RBP14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 KCTD1Q719H9 257 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 DPH6Q7L8W6 267 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 CCSER1Q9C0I3 900 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 AGTPBP1Q9UPW5 1226 aa14.27□□□□□ -0.13
TRAPPC9-201ENST00000389328 LRRD1A4D1F6 860 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 CIB2O75838 187 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 HARSP12081 509 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 MDM2Q00987 491 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 COASYQ13057 564 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 C6orf118Q5T5N4 469 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 ZNF449Q6P9G9 518 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 TMEM139Q8IV31 216 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 CARD10Q9BWT7 1032 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 IMPG2Q9BZV3 1241 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 SLC40A1Q9NP59 571 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 TPX2Q9ULW0 747 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 KLRC1P26715 233 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 TBC1D10BQ4KMP7 808 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 FAM47EQ6ZV65 393 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 PCDHA6Q9UN73 950 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 PCDHA8Q9Y5H6 950 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 TTI1O43156 1089 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 FAM107AO95990 144 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 TRAF1Q13077 416 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 CNBD1Q8NA66 436 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 FNBP1Q96RU3 617 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 FAM217BQ9NTX9 383 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 RABGAP1Q9Y3P9 1069 aa14.26□□□□□ -0.13
TRAPPC9-201ENST00000389328 ZSCAN5CA6NGD5 496 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 H0Y3Z8 333 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 LUC7L3O95232 432 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 TDP2O95551 362 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 PMS1P54277 932 aaKnown RBP14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 ODR4Q5SWX8 454 aa14.25□□□□□ -0.13
TRAPPC9-201ENST00000389328 NT5DC1Q5TFE4 455 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms