RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 GLE1Q53GS7 698 aaKnown RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 FAF2Q96CS3 445 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 ZC4H2Q9NQZ6 224 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 STRIP2Q9ULQ0 834 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 SCINQ9Y6U3 715 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 CYP2D7A0A087X1C5 515 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 PDCD6IPQ8WUM4 868 aaKnown RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 ESRRBO95718 433 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 NR1D1P20393 614 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 MIGA2Q7L4E1 593 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 AGR3Q8TD06 166 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 CEP170P1Q96L14 293 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 WARS2Q9UGM6 360 aaKnown RBP16.74■□□□□ 0.27
ALK-201ENST00000389048 LRFN2Q9ULH4 789 aa16.74■□□□□ 0.27
ALK-201ENST00000389048 UHRF1BP1LA0JNW5 1464 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 TYW5A2RUC4 315 aaKnown RBP16.73■□□□□ 0.27
ALK-201ENST00000389048 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 ARL4AP40617 200 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 UBE3AQ05086 875 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 MCF2L2Q86YR7 1114 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 FAM8A1Q9UBU6 413 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 PACSIN2Q9UNF0 486 aaPredicted RBP16.73■□□□□ 0.27
ALK-201ENST00000389048 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 KIAA0586Q9BVV6 1533 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 HSPA4LO95757 839 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 PTPREP23469 700 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 POLIQ9UNA4 740 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 CD2BP2O95400 341 aaKnown RBP16.73■□□□□ 0.27
ALK-201ENST00000389048 ZNF507Q8TCN5 953 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 SARS2Q9NP81 518 aaKnown RBP16.73■□□□□ 0.27
ALK-201ENST00000389048 GTPBP10A4D1E9 387 aaKnown RBP16.73■□□□□ 0.27
ALK-201ENST00000389048 PRPSAP2O60256 369 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 GPR162Q16538 588 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 TXLNGQ9NUQ3 528 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 ANGPTL2Q9UKU9 493 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 METTL23Q86XA0 190 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 SLC13A4Q9UKG4 626 aa16.73■□□□□ 0.27
ALK-201ENST00000389048 RANBP1P43487 201 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 BEND6Q5SZJ8 279 aaPredicted RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 PYROXD1Q8WU10 500 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 ACCSQ96QU6 501 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 SAYSD1Q9NPB0 183 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 HPS4Q9NQG7 708 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 GTSE1Q9NYZ3 720 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 E2F6O75461 281 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 MCF2P10911 925 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 LMNB2Q03252 620 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 FLOT2Q14254 428 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 DYNLL2Q96FJ2 89 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 GPR101Q96P66 508 aaPredicted RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 CHL1O00533 1208 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 CA4P22748 312 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 HNRNPH2P55795 449 aaKnown RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 MDH1BQ5I0G3 518 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 PPARGC1AQ9UBK2 798 aaKnown RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 DDAH1O94760 285 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 ATP6V1E1P36543 226 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 SYCP2LQ5T4T6 812 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 GRAMD4Q6IC98 578 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 TOGARAM2Q6ZUX3 1019 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 AIFM3Q96NN9 605 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 EFHD1Q9BUP0 239 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 LMCD1Q9NZU5 365 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 KRT14P02533 472 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 PDCLQ13371 301 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 ACBD5Q5T8D3 534 aaPredicted RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 USP17L2Q6R6M4 530 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 CATSPER3Q86XQ3 398 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 RETREG2Q8NC44 543 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 DBNDD1Q9H9R9 158 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 SLC5A4Q9NY91 659 aa16.72■□□□□ 0.27
ALK-201ENST00000389048 TTC7AQ9ULT0 858 aaPredicted RBP16.72■□□□□ 0.27
ALK-201ENST00000389048 CASP1P29466 404 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 TFDP1Q14186 410 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 PPP6R3Q5H9R7 873 aaPredicted RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 SNX19Q92543 992 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 DCPSQ96C86 337 aaKnown RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 RUNDC3BQ96NL0 473 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 TSC22D3Q99576 134 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 MAFGO15525 162 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 ACTN3Q08043 901 aaPredicted RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 TBCCQ15814 346 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 ZNF658Q5TYW1 1059 aaPredicted RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 PI16Q6UXB8 463 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 OTULINQ96BN8 352 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 CCDC124Q96CT7 223 aaKnown RBP16.71■□□□□ 0.27
ALK-201ENST00000389048 SYCE1LA8MT33 242 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 MIS18BP1Q6P0N0 1132 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 RINLQ6ZS11 566 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 FRA10AC1Q70Z53 315 aa16.71■□□□□ 0.27
ALK-201ENST00000389048 TRIML1Q8N9V2 468 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms