RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SEPT2Q15019 361 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 FAM114A2Q9NRY5 505 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 DNAJC17Q9NVM6 304 aaKnown RBP18.63■□□□□ 0.57
SGCB-201ENST00000381431 NOVA2Q9UNW9 492 aaKnown RBP18.63■□□□□ 0.57
SGCB-201ENST00000381431 CSADQ9Y600 493 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 COL15A1P39059 1388 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 NCAPG2Q86XI2 1143 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 GRK7Q8WTQ7 553 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 ACCSQ96QU6 501 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 COA1Q9GZY4 146 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 BARHL2Q9NY43 387 aa18.63■□□□□ 0.57
SGCB-201ENST00000381431 I3L4J1 428 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 ZBTB5O15062 677 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 TRIP13Q15645 432 aaPredicted RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 HADHQ16836 314 aaKnown RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 SGO2Q562F6 1265 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 DCAF15Q66K64 600 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 ATP6V0A1Q93050 837 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 CEP152O94986 1710 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 UBE2Q2LH0YL09 131 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 RNF8O76064 485 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 GRIN1Q05586 938 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 SLC7A3Q8WY07 619 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 P3H4Q92791 437 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 ARHGEF1Q92888 912 aaKnown RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 TDRD3Q9H7E2 651 aaKnown RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 NOD1Q9Y239 953 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 PNPLA7Q6ZV29 1317 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 NCK2O43639 380 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 STK10O94804 968 aaKnown RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 AS3MTQ9HBK9 375 aa18.62■□□□□ 0.57
SGCB-201ENST00000381431 TRPC5Q9UL62 973 aaPredicted RBP18.62■□□□□ 0.57
SGCB-201ENST00000381431 GOLGA8SH3BPF8 625 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 KCNH2Q12809 1159 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 PPP2R5CQ13362 524 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
SGCB-201ENST00000381431 FAM83BQ5T0W9 1011 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 TMC4Q7Z404 712 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 FGGP02679 453 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 PSMD6Q15008 389 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 TTBK2Q6IQ55 1244 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 NFRKBQ6P4R8 1299 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 EEPD1Q7L9B9 569 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 EPB41L4AQ9HCS5 686 aaPredicted RBP18.61■□□□□ 0.57
SGCB-201ENST00000381431 TBK1Q9UHD2 729 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 POTEFA5A3E0 1075 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 INO80B-WBP1J3KQ70 363 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 TNNC2P02585 160 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 POTEIP0CG38 1075 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 SNX16P57768 344 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 GRM4Q14833 912 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 POTEGQ6S5H5 508 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 POTEEQ6S8J3 1075 aa18.61■□□□□ 0.57
SGCB-201ENST00000381431 FOXP4Q8IVH2 680 aaPredicted RBP18.61■□□□□ 0.57
SGCB-201ENST00000381431 NSUN4Q96CB9 384 aaKnown RBP18.61■□□□□ 0.57
SGCB-201ENST00000381431 INO80BQ9C086 356 aaPredicted RBP18.61■□□□□ 0.57
SGCB-201ENST00000381431 KRT81Q14533 505 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 RAB3IL1Q8TBN0 382 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 PCDHA6Q9UN73 950 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 PCDHA8Q9Y5H6 950 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 UTYO14607 1347 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 POLR1AO95602 1720 aaPredicted RBP18.6■□□□□ 0.57
SGCB-201ENST00000381431 STAM2O75886 525 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 CSF1RP07333 972 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 FXR1P51114 621 aaKnown RBP eCLIP18.6■□□□□ 0.57
SGCB-201ENST00000381431 PDCLQ13371 301 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 RUNDC3BQ96NL0 473 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 TYW1Q9NV66 732 aaKnown RBP18.6■□□□□ 0.57
SGCB-201ENST00000381431 TROVE2P10155 538 aaKnown RBP eCLIP18.6■□□□□ 0.57
SGCB-201ENST00000381431 POLR2BP30876 1174 aaKnown RBP18.6■□□□□ 0.57
SGCB-201ENST00000381431 BPIFB4P59827 614 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 ARHGAP4P98171 946 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 BRDTQ58F21 947 aaPredicted RBP18.6■□□□□ 0.57
SGCB-201ENST00000381431 PBKQ96KB5 322 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 LRRIQ1Q96JM4 1722 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 PVALEFA0A1B0GWK0 134 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 H0YCG3 227 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 PEX3P56589 373 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 TAF12Q16514 161 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 MTERF2Q49AM1 385 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 CLEC10AQ8IUN9 316 aa18.6■□□□□ 0.57
SGCB-201ENST00000381431 PACSIN2Q9UNF0 486 aaPredicted RBP18.6■□□□□ 0.57
SGCB-201ENST00000381431 NR1D1P20393 614 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 STAT3P40763 770 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
SGCB-201ENST00000381431 COASYQ13057 564 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 FMO2Q99518 471 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 P4HA1P13674 534 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 GADL1Q6ZQY3 521 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 DNAJC12Q9UKB3 198 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 SEPT14Q6ZU15 432 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 TMEM206Q9H813 350 aa18.59■□□□□ 0.57
SGCB-201ENST00000381431 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
SGCB-201ENST00000381431 MROH7-TTC4A0A0A0MT08 1334 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 ORC4O43929 436 aa18.58■□□□□ 0.57
SGCB-201ENST00000381431 TADA3O75528 432 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms