RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
CDX2-201ENST00000381020 IFFO1Q0D2I5 559 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 KCNH2Q12809 1159 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 CEP55Q53EZ4 464 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 LMBR1Q8WVP7 490 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 NUCKS1Q9H1E3 243 aaKnown RBP13.72□□□□□ -0.21
CDX2-201ENST00000381020 MYO1AQ9UBC5 1043 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 FTCDO95954 541 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 E2F4Q16254 413 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 ADAT2Q7Z6V5 191 aaKnown RBP13.72□□□□□ -0.21
CDX2-201ENST00000381020 GLG1Q92896 1179 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 SUGCTQ9HAC7 445 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 GCNT4Q9P109 453 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 CTTNBP2NLQ9P2B4 639 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 GFPT2O94808 682 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 VAV2P52735 878 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 ORC2Q13416 577 aaPredicted RBP13.72□□□□□ -0.21
CDX2-201ENST00000381020 RPS6KA1Q15418 735 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 NT5DC1Q5TFE4 455 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 RNF207Q6ZRF8 634 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 INTS13Q9NVM9 706 aa13.72□□□□□ -0.21
CDX2-201ENST00000381020 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.21
CDX2-201ENST00000381020 KCNK3O14649 394 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 R3HDM1Q15032 1099 aaKnown RBP13.71□□□□□ -0.21
CDX2-201ENST00000381020 LLGL1Q15334 1064 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 SEPT14Q6ZU15 432 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 PEX26Q7Z412 305 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 SULF1Q8IWU6 871 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 MICALL2Q8IY33 904 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 RABGGTAQ92696 567 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 TNFRSF25Q93038 417 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 CEP170P1Q96L14 293 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 VCPKMTQ9H867 229 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 TNNI1P19237 187 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 PSMC2P35998 433 aaKnown RBP13.71□□□□□ -0.21
CDX2-201ENST00000381020 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDX2-201ENST00000381020 CDR1P51861 262 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 HDLBPQ00341 1268 aaKnown RBP13.71□□□□□ -0.21
CDX2-201ENST00000381020 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.21
CDX2-201ENST00000381020 GRM1Q13255 1194 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 MTMR1Q13613 665 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 MTMR2Q13614 643 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 TUBB2AQ13885 445 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 NPY5RQ15761 445 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 KSR1Q8IVT5 923 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 REXO1L1PQ8IX06 675 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 REEP2Q9BRK0 252 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 TUBB2BQ9BVA1 445 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 PCDHA13Q9Y5I0 950 aa13.71□□□□□ -0.21
CDX2-201ENST00000381020 PEX3P56589 373 aa13.71□□□□□ -0.22
CDX2-201ENST00000381020 KCNK18Q7Z418 384 aa13.71□□□□□ -0.22
CDX2-201ENST00000381020 CATSPER3Q86XQ3 398 aa13.71□□□□□ -0.22
CDX2-201ENST00000381020 CNOT7Q9UIV1 285 aaKnown RBP13.71□□□□□ -0.22
CDX2-201ENST00000381020 NR3C1P04150 777 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 HMGCS2P54868 508 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 CXCL9Q07325 125 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 SH3RF1Q7Z6J0 888 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 LXNQ9BS40 222 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 SEPT9Q9UHD8 586 aaPredicted RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 MED24O75448 989 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 PRELPP51888 382 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 KNOP1Q1ED39 458 aaKnown RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 GNPTABQ3T906 1256 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 CDKAL1Q5VV42 579 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 TTI2Q6NXR4 508 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 SND1Q7KZF4 910 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDX2-201ENST00000381020 SHISA4Q96DD7 197 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 IMPG2Q9BZV3 1241 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 CWC15Q9P013 229 aaKnown RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 MKRN1Q9UHC7 482 aaKnown RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 LRRIQ4A6NIV6 560 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 HNRNPDLO14979 420 aaKnown RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 STRN3Q13033 797 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 SMC1AQ14683 1233 aaKnown RBP13.7□□□□□ -0.22
CDX2-201ENST00000381020 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 OTUD6AQ7L8S5 288 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 DAAM2Q86T65 1068 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 CCDC170Q8IYT3 715 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 CAPN11Q9UMQ6 739 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 EXOC7Q9UPT5 735 aa13.7□□□□□ -0.22
CDX2-201ENST00000381020 SPOPO43791 374 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 H2AFZP0C0S5 128 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 GAP43P17677 238 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 OAS2P29728 719 aaKnown RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 CFAP221Q4G0U5 840 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
CDX2-201ENST00000381020 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 H2AFVQ71UI9 128 aa13.69□□□□□ -0.22
CDX2-201ENST00000381020 POMGNT1Q8WZA1 660 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms