RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PCDHA12Q9UN75 941 aa14.3□□□□□ -0.12
SMN1-202ENST00000380707 FRMPD3Q5JV73 1810 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 GSTTP1A0A1W2PQM5 241 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 LAD1O00515 517 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 NOP56O00567 594 aaKnown RBP14.29□□□□□ -0.12
SMN1-202ENST00000380707 CHMP2AO43633 222 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 MMP3P08254 477 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 CST5P28325 142 aaPredicted RBP14.29□□□□□ -0.12
SMN1-202ENST00000380707 SPIRE1Q08AE8 756 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 PPP2R5CQ13362 524 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 KCNA10Q16322 511 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 ZNF746Q6NUN9 644 aaPredicted RBP14.29□□□□□ -0.12
SMN1-202ENST00000380707 RNF180Q86T96 592 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 ARRDC4Q8NCT1 418 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 CEP131Q9UPN4 1083 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
SMN1-202ENST00000380707 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 ELP1O95163 1332 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 EML1O00423 815 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 PPFIA4O75335 1185 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 ATG7O95352 703 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 HOXD8P13378 290 aaPredicted RBP14.28□□□□□ -0.12
SMN1-202ENST00000380707 PRPHP41219 470 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 TECP42680 631 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 NASPP49321 788 aaPredicted RBP14.28□□□□□ -0.12
SMN1-202ENST00000380707 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
SMN1-202ENST00000380707 KRT76Q01546 638 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 DGKDQ16760 1214 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 ABHD15Q6UXT9 468 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
SMN1-202ENST00000380707 BMP15O95972 392 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 ASGR1P07306 291 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 EN2P19622 333 aaPredicted RBP14.27□□□□□ -0.12
SMN1-202ENST00000380707 MARCKSP29966 332 aaPredicted RBP14.27□□□□□ -0.12
SMN1-202ENST00000380707 TCF7P36402 384 aaPredicted RBP14.27□□□□□ -0.12
SMN1-202ENST00000380707 SLC39A14Q15043 492 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 BRDTQ58F21 947 aaPredicted RBP14.27□□□□□ -0.12
SMN1-202ENST00000380707 ATL3Q6DD88 541 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 DTHD1Q6ZMT9 781 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 SMAP1Q8IYB5 467 aaPredicted RBP14.27□□□□□ -0.12
SMN1-202ENST00000380707 LINC00301Q8NCQ3 95 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 DISC1Q9NRI5 854 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 SAMM50Q9Y512 469 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 PCDHA10Q9Y5I2 948 aa14.27□□□□□ -0.12
SMN1-202ENST00000380707 POTEMA6NI47 508 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 WDR64B1ANS9 1081 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 DNM1LO00429 736 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 MYL3P08590 195 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 ZNF286BP0CG31 522 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMN1-202ENST00000380707 PURAQ00577 322 aaKnown RBP14.26□□□□□ -0.13
SMN1-202ENST00000380707 ARL6IP4Q66PJ3 421 aaKnown RBP14.26□□□□□ -0.13
SMN1-202ENST00000380707 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 CXCL17Q6UXB2 119 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 MIER3Q7Z3K6 550 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 PCSK9Q8NBP7 692 aaKnown RBP14.26□□□□□ -0.13
SMN1-202ENST00000380707 PCYT2Q99447 389 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 TSEN34Q9BSV6 310 aaKnown RBP14.26□□□□□ -0.13
SMN1-202ENST00000380707 TCEAL9Q9UHQ7 104 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 CFAP45Q9UL16 551 aa14.26□□□□□ -0.13
SMN1-202ENST00000380707 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 VWA3AA6NCI4 1184 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 CCDC85CA6NKD9 419 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 KBTBD13C9JR72 458 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 ZEB2O60315 1214 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 LGALS2P05162 132 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 SUPT20HL2P0C7V6 817 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 NCLP19338 710 aaKnown RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 SFNP31947 248 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 JAK3P52333 1124 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 ACLYP53396 1101 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 GRIN1Q05586 938 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 STK38Q15208 465 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 TMEM266Q2M3C6 531 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 MIS18BP1Q6P0N0 1132 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 TRIM50Q86XT4 487 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 CCDC60Q8IWA6 550 aaPredicted RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 IGSF22Q8N9C0 903 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 KAT2BQ92831 832 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 C16orf70Q9BSU1 422 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 MOXD2PA6NHM9 499 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 SPTLC2O15270 562 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 LGR5O75473 907 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 YEATS4O95619 227 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 PSAPP07602 524 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 KRT85P78386 507 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 PDIA5Q14554 519 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 RDM1Q8NG50 284 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 FERMT2Q96AC1 680 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 FBXO2Q9UK22 296 aaPredicted RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 RCOR1Q9UKL0 485 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 PHF24Q9UPV7 400 aa14.25□□□□□ -0.13
SMN1-202ENST00000380707 MORC2Q9Y6X9 1032 aaPredicted RBP14.25□□□□□ -0.13
SMN1-202ENST00000380707 A0A1W2PQ45 241 aaPredicted RBP14.24□□□□□ -0.13
SMN1-202ENST00000380707 A0A1W2PQY0 241 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms