RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RSRC2Q7L4I2 434 aaKnown RBP17.36■□□□□ 0.37
COL2A1-202ENST00000380518 BEGAINQ9BUH8 593 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 SERPINB6P35237 376 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 FAM160B2Q86V87 743 aa17.36■□□□□ 0.37
COL2A1-202ENST00000380518 CLCN6P51797 869 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 TMTC3Q6ZXV5 915 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 NNTQ13423 1086 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 FOXP4Q8IVH2 680 aaPredicted RBP17.35■□□□□ 0.37
COL2A1-202ENST00000380518 ACTN1P12814 892 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 CCND2P30279 289 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 ARL4AP40617 200 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 MCAMP43121 646 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 EIF3BP55884 814 aaKnown RBP17.35■□□□□ 0.37
COL2A1-202ENST00000380518 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 RAPH1Q70E73 1250 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 EFCAB13Q8IY85 973 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 ADAMTS1Q9UHI8 967 aa17.35■□□□□ 0.37
COL2A1-202ENST00000380518 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
COL2A1-202ENST00000380518 RRP15Q9Y3B9 282 aaKnown RBP17.35■□□□□ 0.37
COL2A1-202ENST00000380518 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 PIGBQ92521 554 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 SDCCAG3Q96C92 435 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 FMO2Q99518 471 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 HAUS8Q9BT25 410 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 SNX25Q9H3E2 840 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 GRAPQ13588 217 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 CASP8Q14790 479 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 TMED2Q15363 201 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 TMED8Q6PL24 325 aaPredicted RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 CCNYQ8ND76 341 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 RASGRF2O14827 1237 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 TOB2Q14106 344 aaPredicted RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 EMBQ6PCB8 327 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 TRIM56Q9BRZ2 755 aaKnown RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 CALN1Q9BXU9 219 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 BHMT2Q9H2M3 363 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 SLC38A10Q9HBR0 1119 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 NXF1Q9UBU9 619 aaKnown RBP17.34■□□□□ 0.37
COL2A1-202ENST00000380518 MT-ND3P03897 115 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 ARHGAP27Q6ZUM4 889 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 RSPH3Q86UC2 560 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 SMYD2Q9NRG4 433 aa17.34■□□□□ 0.37
COL2A1-202ENST00000380518 STK36Q9NRP7 1315 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.37
COL2A1-202ENST00000380518 ZBTB24O43167 697 aaPredicted RBP17.33■□□□□ 0.37
COL2A1-202ENST00000380518 GCKP35557 465 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 BASP1P80723 227 aaKnown RBP17.33■□□□□ 0.37
COL2A1-202ENST00000380518 KIF22Q14807 665 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 LLGL1Q15334 1064 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 SURF1Q15526 300 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 SUSD4Q5VX71 490 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 RHOT2Q8IXI1 618 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 NLRP7Q8WX94 980 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 PBRM1Q86U86 1689 aa17.33■□□□□ 0.37
COL2A1-202ENST00000380518 LRRD1A4D1F6 860 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 DDIT3P35638 169 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 DR1Q01658 176 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 RCN2Q14257 317 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 KLHL29Q96CT2 875 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 CCDC188H7C350 402 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 ADCY1Q08828 1119 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 UNC13DQ70J99 1090 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 DNAAF3Q8N9W5 541 aa17.33■□□□□ 0.36
COL2A1-202ENST00000380518 CLGNO14967 610 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 PSAPP07602 524 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 AP3B2Q13367 1082 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 CUL1Q13616 776 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 MTERF2Q49AM1 385 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 CLEC4GQ6UXB4 293 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 TTC4O95801 387 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 LRGUKQ96M69 825 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 GDAQ9Y2T3 454 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 STX1BP61266 288 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 DYNLT1P63172 113 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 DARS2Q6PI48 645 aaKnown RBP17.32■□□□□ 0.36
COL2A1-202ENST00000380518 NPHP4O75161 1426 aaPredicted RBP17.32■□□□□ 0.36
COL2A1-202ENST00000380518 ESYT2A0FGR8 921 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 ZNF233A6NK53 670 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 NR1D1P20393 614 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 SLCO1A2P46721 670 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 C4orf50Q6ZRC1 276 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 RAB44Q7Z6P3 723 aaPredicted RBP17.32■□□□□ 0.36
COL2A1-202ENST00000380518 MCUQ8NE86 351 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 TCP11Q8WWU5 503 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 MXD3Q9BW11 206 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
COL2A1-202ENST00000380518 A0A087WUV0 522 aaPredicted RBP17.31■□□□□ 0.36
COL2A1-202ENST00000380518 NOVA2Q9UNW9 492 aaKnown RBP17.31■□□□□ 0.36
COL2A1-202ENST00000380518 WDR19Q8NEZ3 1342 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 EXOC1LA0A1B0GW35 172 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 MTA3Q9BTC8 594 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 RWDD2BP57060 319 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 PDXDC2PQ6P474 469 aa17.31■□□□□ 0.36
COL2A1-202ENST00000380518 KCTD6Q8NC69 237 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms