RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 RABGAP1Q9Y3P9 1069 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 MRFAP1Q9Y605 127 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 LTBP3Q9NS15 1303 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 CTNND1O60716 968 aaKnown RBP27.67■■■□□ 2.02
NDEL1-202ENST00000380025 ERCC3P19447 782 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 CASP5P51878 434 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 PRELPP51888 382 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 DGKZQ13574 1117 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 TBC1D10BQ4KMP7 808 aaPredicted RBP27.67■■■□□ 2.02
NDEL1-202ENST00000380025 ZFP91Q96JP5 570 aaPredicted RBP27.67■■■□□ 2.02
NDEL1-202ENST00000380025 RUSC1Q9BVN2 902 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 TUFT1Q9NNX1 390 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 HACL1Q9UJ83 578 aa27.67■■■□□ 2.02
NDEL1-202ENST00000380025 CTTNQ14247 550 aaKnown RBP27.66■■■□□ 2.02
NDEL1-202ENST00000380025 ERCC6LQ2NKX8 1250 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 SFR1Q86XK3 245 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 ZC3H3Q8IXZ2 948 aaKnown RBP27.66■■■□□ 2.02
NDEL1-202ENST00000380025 HOOK2Q96ED9 719 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 CARD6Q9BX69 1037 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 GINM1Q9NU53 330 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 CGNQ9P2M7 1197 aaKnown RBP27.66■■■□□ 2.02
NDEL1-202ENST00000380025 EPHB6O15197 1021 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 CHMP2AO43633 222 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 SLITRK3O94933 977 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 CLEC4DQ8WXI8 215 aa27.66■■■□□ 2.02
NDEL1-202ENST00000380025 CNOT7Q9UIV1 285 aaKnown RBP27.66■■■□□ 2.02
NDEL1-202ENST00000380025 GAS7O60861 476 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 ARP10275 920 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 SETQ01105 290 aaPredicted RBP27.65■■■□□ 2.02
NDEL1-202ENST00000380025 ZNF569Q5MCW4 686 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 EPM2AIP1Q7L775 607 aaPredicted RBP27.65■■■□□ 2.02
NDEL1-202ENST00000380025 ZNF397Q8NF99 534 aaPredicted RBP27.65■■■□□ 2.02
NDEL1-202ENST00000380025 DYDC2Q96IM9 177 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 ZNHIT6Q9NWK9 470 aaKnown RBP27.65■■■□□ 2.02
NDEL1-202ENST00000380025 COL20A1Q9P218 1284 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 GJA3Q9Y6H8 435 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 FZD9O00144 591 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 NFIBO00712 420 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 CCDC40Q4G0X9 1142 aa27.65■■■□□ 2.02
NDEL1-202ENST00000380025 FAM207AQ9NSI2 230 aaPredicted RBP27.65■■■□□ 2.02
NDEL1-202ENST00000380025 RPTORQ8N122 1335 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 RSPH10B2B2RC85 870 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 RSPH10BP0C881 870 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 MARSP56192 900 aaKnown RBP27.64■■■□□ 2.02
NDEL1-202ENST00000380025 PPP4R3CPQ6ZMV5 832 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 MNS1Q8NEH6 495 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 ZNF577Q9BSK1 485 aa27.64■■■□□ 2.02
NDEL1-202ENST00000380025 TADA3O75528 432 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 HERVK_113P62684 666 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 CDK17Q00537 523 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 EDRF1Q3B7T1 1238 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 TPH2Q8IWU9 490 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 PIGOQ8TEQ8 1089 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 CD2APQ9Y5K6 639 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 DOCK1Q14185 1865 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 GNA14O95837 355 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 NBPF12Q5TAG4 269 aaPredicted RBP27.63■■■□□ 2.01
NDEL1-202ENST00000380025 RINT1Q6NUQ1 792 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 CCDC125Q86Z20 511 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 SGIP1Q9BQI5 828 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 MXRA8Q9BRK3 442 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 UNC45AQ9H3U1 944 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 MMRN2Q9H8L6 949 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 NHEJ1Q9H9Q4 299 aaPredicted RBP27.63■■■□□ 2.01
NDEL1-202ENST00000380025 SLC38A10Q9HBR0 1119 aa27.63■■■□□ 2.01
NDEL1-202ENST00000380025 HNRNPH3P31942 346 aaKnown RBP27.62■■■□□ 2.01
NDEL1-202ENST00000380025 HOXD13P35453 343 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 GHRHRQ02643 423 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 B3GNT9Q6UX72 402 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 SLC35F6Q8N357 371 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 CCDC155Q8N6L0 562 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 WDR11Q9BZH6 1224 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 TANGO6Q9C0B7 1094 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 TRIM59Q8IWR1 403 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 CCDC170Q8IYT3 715 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 FBXO41Q8TF61 875 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 MYO1AQ9UBC5 1043 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 PLAGL2Q9UPG8 496 aa27.62■■■□□ 2.01
NDEL1-202ENST00000380025 MYBP10242 640 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 ITGB5P18084 799 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 VCAM1P19320 739 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 CYLC1P35663 651 aaPredicted RBP27.61■■■□□ 2.01
NDEL1-202ENST00000380025 KCNMA1Q12791 1236 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 ADAM9Q13443 819 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 MTMR2Q13614 643 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 CPXCR1Q8N123 301 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 ARID3AQ99856 593 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 BCAS3Q9H6U6 928 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 RAVER2Q9HCJ3 691 aaKnown RBP27.61■■■□□ 2.01
NDEL1-202ENST00000380025 TRAF3IP3Q9Y228 551 aa27.61■■■□□ 2.01
NDEL1-202ENST00000380025 IPO5O00410 1097 aaKnown RBP27.6■■■□□ 2.01
NDEL1-202ENST00000380025 KNOP1Q1ED39 458 aaKnown RBP27.6■■■□□ 2.01
NDEL1-202ENST00000380025 SMCR8Q8TEV9 937 aaPredicted RBP27.6■■■□□ 2.01
NDEL1-202ENST00000380025 CCDC94Q9BW85 323 aaPredicted RBP27.6■■■□□ 2.01
NDEL1-202ENST00000380025 TRIM10Q9UDY6 481 aa27.6■■■□□ 2.01
NDEL1-202ENST00000380025 PARP14Q460N5 1801 aa27.6■■■□□ 2.01
NDEL1-202ENST00000380025 EFCAB8A8MWE9 144 aa27.6■■■□□ 2.01
NDEL1-202ENST00000380025 ZBTB39O15060 712 aa27.6■■■□□ 2.01
NDEL1-202ENST00000380025 TBCAO75347 108 aaKnown RBP27.6■■■□□ 2.01
NDEL1-202ENST00000380025 MUTP22033 750 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms