RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 KIF4BQ2VIQ3 1234 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 VWA3BQ502W6 1294 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 MIIPQ5JXC2 388 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 NCAPH2Q6IBW4 605 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 CCDC84Q86UT8 332 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 SAMD3Q8N6K7 520 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF397Q8NF99 534 aaPredicted RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 LPAR1Q92633 364 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 HHIPL1Q96JK4 782 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 DESI2Q9BSY9 194 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 TUFT1Q9NNX1 390 aa11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNHIT6Q9NWK9 470 aaKnown RBP11.62□□□□□ -0.55
POLR2J3-201ENST00000379340 IGLV3-22A0A075B6J6 115 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM155AB1AL88 458 aaPredicted RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 SSBP05455 408 aaKnown RBP eCLIP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 KRT18P05783 430 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 TRIM21P19474 475 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 ERVK-24P63145 666 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 MTF1Q14872 753 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 MEA1Q16626 185 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 ZCWPW2Q504Y3 356 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 ARHGAP29Q52LW3 1261 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 KIAA1755Q5JYT7 1200 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 LRRC55Q6ZSA7 311 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 CATSPER3Q86XQ3 398 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 TSC1Q92574 1164 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 EDEM3Q9BZQ6 932 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 VAV3Q9UKW4 847 aa11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 RBBP6Q7Z6E9 1792 aaKnown RBP11.61□□□□□ -0.55
POLR2J3-201ENST00000379340 URI1O94763 535 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 EYA4O95677 639 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 CFBP00751 764 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 HOXA13P31271 388 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 CYLC1P35663 651 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 STAT3P40763 770 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 KRT83P78385 493 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 GHRHRQ02643 423 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 CCDC174Q6PII3 467 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 ZNF662Q6ZS27 426 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 KRT26Q7Z3Y9 468 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 ZC3H3Q8IXZ2 948 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 CCDC170Q8IYT3 715 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 MNS1Q8NEH6 495 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 SLC5A5Q92911 643 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 HPS3Q969F9 1004 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 GJA10Q969M2 543 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 MAP3K20Q9NYL2 800 aaKnown RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 COL4A3BPQ9Y5P4 624 aa11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 EPN1Q9Y6I3 576 aaPredicted RBP11.6□□□□□ -0.55
POLR2J3-201ENST00000379340 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 NDUFA10O95299 355 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 ICAM1P05362 532 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 SPATA31C1P0DKV0 1188 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 FDX1P10109 184 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 GAP43P17677 238 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 HUNKP57058 714 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 MAP3K9P80192 1104 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 NOGQ13253 232 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 PPP2R5CQ13362 524 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 MAPK8IP2Q13387 824 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 RASA3Q14644 834 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 HERC4Q5GLZ8 1057 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 POTEEQ6S8J3 1075 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 MCF2L2Q86YR7 1114 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 NEK9Q8TD19 979 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 HOOK2Q96ED9 719 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 PCMTD1Q96MG8 357 aaPredicted RBP11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 FEZ1Q99689 392 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 DOCK1Q14185 1865 aa11.59□□□□□ -0.55
POLR2J3-201ENST00000379340 PHF20L1A8MW92 1017 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 RNF225M0QZC1 329 aaPredicted RBP11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 CTNND1O60716 968 aaKnown RBP11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 PSMD10O75832 226 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 HNRNPH3P31942 346 aaKnown RBP11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 HSD17B4P51659 736 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 TUBB4BP68371 445 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 PPP2R3AQ06190 1150 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 CEP55Q53EZ4 464 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 NIPA1Q7RTP0 329 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 PRPF38AQ8NAV1 312 aaKnown RBP11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 WDR24Q96S15 920 aa11.58□□□□□ -0.55
POLR2J3-201ENST00000379340 EIF2AK1Q9BQI3 630 aaKnown RBP11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms