RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 PSAPP07602 524 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 ZBED6P86452 979 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 PPP2R5AQ15172 486 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 PTPROQ16827 1216 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 NBPF9Q3BBW0 867 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 DACT2Q5SW24 774 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 HINFPQ9BQA5 517 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 FBXO40Q9UH90 709 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
SHROOM1-203ENST00000378679 ESYT2A0FGR8 921 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 ANKRD65E5RJM6 399 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 WDR46O15213 610 aaKnown RBP15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 TEX33O43247 280 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 BUB1O43683 1085 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 H2AFZP0C0S5 128 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 COASYQ13057 564 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 FAM47CQ5HY64 1035 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 RNF187Q5TA31 235 aaPredicted RBP15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 H2AFVQ71UI9 128 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 DYDC1Q8WWB3 177 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 DISP2A7MBM2 1401 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 FDX1P10109 184 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 TMOD1P28289 359 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 COG2Q14746 738 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 STXBP2Q15833 593 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 CRY2Q49AN0 593 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 PADI6Q6TGC4 694 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 MB21D1Q8N884 522 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 TRIM58Q8NG06 486 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 TMEM206Q9H813 350 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 C1orf112Q9NSG2 853 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 MTUS1Q9ULD2 1270 aa15.52■□□□□ 0.08
SHROOM1-203ENST00000378679 HSF2BPO75031 334 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 RPS12P25398 132 aaKnown RBP15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 OAS2P29728 719 aaKnown RBP15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 MICALL1Q8N3F8 863 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 ZNF280CQ8ND82 737 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 EIF2AK1Q9BQI3 630 aaKnown RBP15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 RASSF4Q9H2L5 321 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 RASAL2Q9UJF2 1139 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 CNGA1P29973 690 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 CYP27A1Q02318 531 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 ACRBPQ8NEB7 543 aa15.52■□□□□ 0.07
SHROOM1-203ENST00000378679 SHTN1A0MZ66 631 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 TGFB2P61812 414 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 C8orf74Q6P047 294 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 GSTA5Q7RTV2 222 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 GUF1Q8N442 669 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 HACL1Q9UJ83 578 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 SHMT1P34896 483 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 QARSP47897 775 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 GYS2P54840 703 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 RHBDL3P58872 404 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 FMR1Q06787 632 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 BAATQ14032 418 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 LIN9Q5TKA1 542 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 ACAD9Q9H845 621 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 SPC25Q9HBM1 224 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 MARK3P27448 753 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 GBP2P32456 591 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 MYL7Q01449 175 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 SEL1L2Q5TEA6 688 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 C15orf52Q6ZUT6 534 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 CERS5Q8N5B7 392 aa15.51■□□□□ 0.07
SHROOM1-203ENST00000378679 LGALS16A8MUM7 142 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 LRRN2O75325 713 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 KRT76Q01546 638 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 RASSF7Q02833 373 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 EVX2Q03828 476 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 ZFPM1Q8IX07 1006 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 DPF2Q92785 391 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 LXNQ9BS40 222 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 EHD4Q9H223 541 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 ACTN4O43707 911 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 MFAP3LO75121 409 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 CAP2P40123 477 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 DCUN1D2Q6PH85 259 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 FBXO38Q6PIJ6 1188 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 SH2D3AQ9BRG2 576 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 ADPGKQ9BRR6 497 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 PNMA3Q9UL41 463 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 ZSCAN20P17040 1043 aaPredicted RBP15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 JAK3P52333 1124 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 SLC35F6Q8N357 371 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 SLC17A8Q8NDX2 589 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 AGBL1Q96MI9 1066 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 TEX13BQ9BXU2 312 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 GCNT4Q9P109 453 aa15.5■□□□□ 0.07
SHROOM1-203ENST00000378679 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 DPYDQ12882 1025 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 STK4Q13043 487 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 KCNB1Q14721 858 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 IL17RAQ96F46 866 aa15.49■□□□□ 0.07
SHROOM1-203ENST00000378679 TMEM191BP0C7N4 346 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms